Salvelinus namaycush (lake trout): 120065568
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Entry
120065568 CDS
T07522
Symbol
gli1
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120065568 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065568 (gli1)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120065568 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
FOXP-CC
Zap1_zf1
DnaT
Motif
Other DBs
NCBI-GeneID:
120065568
NCBI-ProteinID:
XP_038872560
UniProt:
A0A8U1FAQ7
LinkDB
All DBs
Position
Sna20:complement(7303094..7354734)
Genome browser
AA seq
1496 aa
AA seq
DB search
MPVDMQPHQGLYHYESTPNQPPRGLAPSGRSPYSEVSSLHAPLHNGHPQDCRNMYNPMTP
NPRINPNSGVNPMDQYMRPPLAPPLHSMMGHRSMNQSSDGGNSTPYCHNNLMSSHHGFPH
GQGLDHVGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCG
PNGASSYGHLSVGAMSPSMGYSNSMNYQSRQHGSMYGGHTPGPCHAPPPRLPPHNPRLHA
PKHGHLKTEPVLGSVMDGITIKSLEERSEGDVASPSSTGTQDPLMGLLEGREDLDKEDKP
EPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQECSREQRPFKAQYM
LVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASD
RAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPG
SSLTPGGQSGELLLEKEETRHREDCKLLAPESALKSQPSPGGQSSCSSERSPLGSANNND
SGVEMNLNAAGSLEDLTALEDGGAGGGGEAGGRGQGMAGMGGTSAQALKRLENLKIDKLK
QIRRPTPPGRCGRSSKLPALTGEMMGGMCSPSPLLSNRRVMELSNHELGGIPSGMPPPIS
DRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSHCLSVXGTTVPGDPLSPETSRRRG
PCHGVGGGGGLPGLPCLTPAQQYSLKAKYAAATGGPPPTPLSSMEQGAGTPGRRGVLLSE
YQGQPLPAFLQQGGQRRHSANTGEYGTGVIYPHQAPGNATRRASDPVRSTGDSQALPKVQ
RFNSLNNVAMMGRRNALQHCGSDANIARHMYSPRPPSITENVMMEAMATDYHGGTTDARN
HCMMLSPGERGFQGYQSHHMGGPTSLLSPSHDSLGCPEQGYQTQGQMFMQGGHYQGTSRG
PGQGQMGQGVPVHPEGMSNILLQQAEYSMSTCQLSPSGPHYPSLDQGGPDGGTGAWVESS
QVQTTHGVLQTEMQYQDQGSMQGQTQGLYTQEPDGGHKLIIKPEQQQYHPALANPDACQK
QLHQHQHGYPQQGQPGQGMMRTTNLSCDFHGGGMENQNQASMQQGKQQGSFPQSGGISLG
SAALGAGGRSQTPMMQVKEMMVRNYVQSQQALMWGQGQDQRGIGVDGKPLPLSDSIDMTG
QQQQHSPQHQHNLYPNPGSSYPGYPTNQNLMSPPAHNRVPSSSSSIPPTEVPMTGLPGGP
GSCYGQDMGAPVVPRPPQCRKPISRQNSLQSQGGGAYLGSPPHLSPVHSTSSPRRVVRLP
PVQGHMTPHQTHQEIFPPLNNINNNMYYSGQIHSDLDKQQIQQISHPHQDPTQTGPCLNQ
HQHQQHMVTHMDHQGNKSASLAYLHESTPISNALENLDLDNAQIDFTSIIDDPDPSSFSP
INPPLHGGPSQTSSRLTTPQTSITMPPSGLPNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacatcaggggctgtatcattatgagtctacacccaaccag
ccgcccagaggccttgctccttcaggaaggtctccctacagtgaagtgtcatccctgcac
gctccgctccacaacggccatcctcaggactgcaggaacatgtataacccaatgacccct
aaccccagaatcaatcctaactccggtgtcaaccccatggaccagtacatgcgaccccct
ctggctcccccactgcacagcatgatgggacaccgcagcatgaatcagtcctccgacggt
ggtaatagcaccccctactgtcacaacaacctcatgtcatcccaccacggcttcccccac
ggacagggattagaccatgtgggagatggctcgcggttctcaacgcctcgctccatgctg
aagctgagtaagaagcgtgccttgtccatctctccgctgtctgacgccagcgtggaccta
cagacggtcatcaggacctctcctaactccttggtggccttcgtcaactcacgttgtgga
cccaacggagccagctcctacggacatctgtctgtgggcgccatgagtccatcaatgggt
tactccaactcaatgaactaccagtccagacaacacggctctatgtacggtggacacacc
cctggaccctgccacgcccctcccccccgactacccccccacaacccccgcctccacgca
ccaaaacatggacacctaaagaccgagccagtgctgggtagtgtgatggatgggatcacc
attaagagtctggaggagaggtctgaaggtgacgtggccagcccatcctctactggcaca
caggatcctctgatgggtctgctggaggggcgggaggatctggataaggaggataaaccg
gaaccagaggccatctatgagaccaactgccactgggagagctgcagcaaggagtttgac
acgcaggagcagctagtccaccacataaacaacgagcacatccacggagagaagaaggag
tttgtgtgccactggcaggagtgttccagggagcagagacctttcaaggcccagtacatg
ctggtggttcacatgcgcaggcacacaggagagaaaccgcataagtgtacttttgagggc
tgcaacaaggcctactctcgcctggagaacctgaagacccacctgcggtctcatacaggg
gagaagccgtatgtctgtgaacacgagggatgcaacaaagccttctccaacgcctcggac
agagccaagcaccagaaccgcacacactccaacgagaagccgtatgtgtgtaagatccct
gggtgtacgaagcgctacacagaccccagctctctgcggaagcacgtgaagacagtccac
ggccctgaggctcacatcactaagaagcaccgaggggacactgggccccggccgcctggc
tcatcactgacccccggtggacagtctggtgaactgctgctggagaaagaggagactaga
cacagggaggactgcaaactgctggcgcctgaatctgctctgaagtctcagcccagtccg
ggtggccagtcgtcctgcagtagcgagcgttctcctctggggagcgcgaacaacaacgac
agtggtgtggagatgaacctgaacgcagcagggagcctggaggacctgaccgctctggag
gacggaggggcgggaggaggaggcgaagctgggggaagagggcagggcatggcagggatg
gggggcacgtcggctcaggccctaaagagactagagaacctgaagatagacaagctgaaa
cagatcagaaggcccactccacctggacgctgtggtcggagtagcaagctaccagcactc
acaggagagatgatgggagggatgtgtagtccctcgcccctcctctccaaccgccgcgtc
atggaactgtccaatcacgagctgggcggcataccctctggcatgcccccccctatcagt
gaccggagggggagtggcaccagcagcctgagctctgcctacacagtgagccgccgttct
tccatggtgtccccctacctctctagccggcgctcgagcgaggtctcccactgtttgtcg
gtctaaggcactacagttccgggtgaccccctctcccctgagaccagccgccgaagaggg
ccctgccatggtgttggagggggaggagggttgccaggtctgccttgtctaacacccgct
cagcaatacagcctgaaggctaagtatgcagcagcaactggcggcccaccccctacccca
ctgtccagtatggaacagggagcagggacacccgggagacgaggagtactcctcagcgag
taccagggtcagccgctacctgcgttcctgcagcaggggggtcagaggagacacagtgcc
aacacgggggagtatggcactggggtcatctaccctcaccaagccccagggaatgccacc
cggcgtgccagcgaccccgtccgctccaccggcgactcacaggcccttcccaaggtgcaa
cgcttcaacagcctgaacaatgtggccatgatgggccggaggaacgccctgcagcattgt
gggtcagacgccaacatcgcccgccacatgtactcgccgcggccacccagcattacagag
aatgtcatgatggaggccatggctacggactaccatggaggaaccacggatgccaggaac
cactgcatgatgctttccccaggagagagaggtttccagggctaccagtcccaccacatg
gggggtcccaccagcctgttatcacccagccacgacagcctgggatgcccagagcagggc
taccagacacagggacagatgttcatgcagggtgggcactaccagggcacctccagagga
ccaggtcagggccagatggggcagggggtacctgttcacccagaggggatgtccaacatc
ttgctgcagcaggctgagtacagtatgagtacctgccagcttagtccctctggaccacac
taccccagcctggaccagggtggccccgatggaggtacaggggcctgggtagagagcagc
caggtccagaccactcatggagttcttcagacagagatgcagtatcaggaccagggctct
atgcagggccagacacagggtctgtacacccaagagcccgatggcggacacaaactgatc
atcaaaccagaacagcagcagtaccacccagccctagccaacccagatgcctgccagaag
caactccaccaacaccagcacggttacccccagcaagggcagcctggccagggcatgatg
aggaccaccaacctcagctgtgacttccatggaggaggcatggagaaccagaaccaggcc
tccatgcagcaagggaagcagcagggttccttcccccaaagcggcggcatcagcctgggg
tcggctgcgctgggtgctgggggtcgctcccagacacccatgatgcaggtgaaggagatg
atggtgaggaactatgtgcagtcgcagcaggctctgatgtggggtcaggggcaggaccag
agggggataggagtggacgggaaacctcttcctctgtcagacagcattgacatgacagga
cagcagcaacagcatagtcctcaacaccaacataatctctatcccaacccaggctccagc
tacccaggctaccctaccaaccagaacctgatgagccccccagcacacaaccgagtcccc
agctctagctcctccatccccccgacggaggtacccatgacgggtctgcctggaggccca
gggtcctgctacggccaggacatgggggctcctgtagtcccaagacccccccagtgccgg
aagcccatcagcaggcagaatagtctccagtcccagggaggtggagcgtacctgggcagt
cctccccacctcagcccagttcactccacctccagccccagacgtgtggtccgtctgccc
cctgtccagggccacatgaccccccatcagacccaccaggagatcttcccccccttaaac
aacatcaacaataacatgtactactctggccagatccactctgacctggacaagcagcag
atccagcaaatcagccaccctcaccaggacccaactcagaccgggccctgcctcaaccag
caccagcaccaacagcacatggtaacccacatggatcaccagggcaataagtctgcgtcc
ctagcctaccttcatgagtcgacccccatctccaatgctctggagaacctagatctggac
aacgcccagatagactttacctccatcatcgacgacccagacccctcgtcattcagcccc
atcaaccctcctctccatgggggtccgtcccagacctcgtcccgcctcaccacccctcag
acatccatcaccatgcccccctctgggctccctaacatggctgtaggagacatgacctcc
atgttgacatctctggccggagagaacaagtaccttaatacactgtcttag
DBGET
integrated database retrieval system
