Salvelinus namaycush (lake trout): 120065602
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Entry
120065602 CDS
T07522
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065602
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120065602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
120065602
NCBI-ProteinID:
XP_038872623
UniProt:
A0A8U1FB09
LinkDB
All DBs
Position
1:complement(23728868..23758751)
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AA seq
1443 aa
AA seq
DB search
MKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLILT
SAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLVASCLVAGERLN
QEHTQGVIYTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSIL
FKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGSE
GYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADGDGDPR
RKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSLNLLEGLSRTVAYMTHSQLLCLVDFVR
SVMAGDHLREEEHIILETLMANVPQSRTVKSNSLELTPSNTPQLSPTTTPANKKNRNLAA
SRSRSRTELAQQEEAEASSMESLQEVMPEEVLVISLGSSLQTIPGMMSENEVLTVQQTDG
AQGYTPVDDTKHHCKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGP
SGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSD
FDPNIDEDRLQEIAGAAVENMLGSLLCLPGSGSVLLDPYGSTISETTSEAWSVEVLPSDS
EAPDLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSVVSATSEDIPNKTEDLRS
ECSSDFGGKDSVTSPDGEESSHGAHHSLASPPSQADSLLAMFDPLSSGEDSSTGTIVRPK
VHYARPLHPPPDPPIPETCALGQEPRYSLFTPHCLAQAELEHTKQRHSYTDRLVRSRSSD
IVCPGRRPTSDPGLNRRAAAEERDHAGAFFMGPFSSPSKDSLKGEVEERKDSDEEKSDRN
RPWWKKRFQSAIPKAPIAALRKRDKQEKDNMGHERVPQDDPLFRNSQAQAAEDILDKYRN
IKRTSPSEGATAAAYDATELCGEECVHNSPRDEALQNMSTDDLPDSASQTAQQHDSNKFS
FSDAKKKLRLALCSAESVAFPLMAPATTRNGLPDHTDFEDNEIVCFLKVQLAEAINLQDK
NQMAQIQETTRCVSRFDTRTCKKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSHAHLERLL
QRVLRDKEVANRYFTTVCVRLLLEHMEAKSLDFIKAFQGCTASDDKTAAVEDFLRYLYGA
MAHDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLLQEHIARLSKVV
TANHKALQIPEVYAREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDS
VPGADDFVPVLVFVLIKANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTID
DRK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacatccacactctggcccatcacctgaagcaggagcggctgtatgtggcc
tcagagaagcagctgatccagcggctcaatggggacgtgctgaagactgctgagaggctg
taccgtgctgcctggatcaccaagcagcagaggatcaacctcgaccggctcatcctcacc
agtgctgaggcttccccggccgaatgctgccagcatgccaaagtgctggaggacacacag
ttcctggatggttacaagactctgggcttccaggagagcatctacggggagttcctgggc
cgggtgcgggagaatccccggctggtggcctcctgcctggtggctggggagaggctgaac
caggagcacacacagggggtcatttacactgttttcacctcactctatggcaactgtatc
atgcaggaggatgagagctacctcttgcaggtcctgcgatacttggtggagtttgagcta
aaggagagcgacaaccctcggcggctgctgcggcgaggcacgtgcgccttcagcatcctc
ttcaagctcttctctgaggggctgtactccgccaagctcttcctcaccgccaccctccac
gagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctccaag
gtgacagagcgcttcacgccggcgcagcaggagcgcctgtttggggagaagggctcggag
ggctacaggcagaaggtggcggctgctgtggaggccaatgaggccaagctggtgaccctg
gtcaacaagttcattggctacctgaagcagaacacctactgcttcccccacaacctgcgt
tggattgtgtctcagatgtacaagacgctgtcgtgtgtggagaggctagaggtgggcgag
gtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtcaac
cctgagcagtatggcataatctcagatgcccctatcaacgaggtggctcgcttcaacctc
atgcaggtagggcagcttcttcaacagttggcaatggctgacggtgatggagaccccagg
aggaaaaacagtttggccaagttcgataagagctgcgtagctgccttcttggatgtggta
atcggagggagagctgtggagacgccgcccatgtcctccttgaacctacttgaaggcctc
agcaggactgtggcgtacatgacacacagtcagctgctctgcctggtggactttgtacgg
agtgtgatggcaggggaccacctccgggaggaggagcacataatcctggagaccctaatg
gccaacgtgccccagtcccgcacagtgaagagcaacagtctggagctcaccccctccaac
accccccagctttccccaaccaccacccccgccaacaagaagaacaggaacttagcagcc
tcccgcagtcgcagccgtactgagctggcccagcaggaggaagcagaggccagctccatg
gaatccctgcaggaggtgatgccagaagaggtcctggtgatctcactaggaagcagcctg
cagaccatccccggcatgatgtcagagaatgaggtgttgaccgtgcagcagactgatgga
gcacaagggtacactcctgtagacgacaccaagcaccattgcaaaccagacaaaaccctg
cgtttctccctctgcagtgacaacctggagggtatctcagagggtccgtccaaccggtct
aactctgtgtcgtctctggacctggagggagagtctgtgtcagagctgggagctgggcca
tcagggagcaatggggtggaggctctacaactgctggagcatgaacatgccaccactcag
gacaacctggatgacaaactgaggaagtttgagatacgagacatgatgggcctgacagat
gaccgggatatctctgagactgtgagtgagacctggagcacagacgtgctgggcagcgac
tttgaccccaacatagacgaagatagactgcaggaaatagctggggcggctgtagagaac
atgctgggcagcctgctgtgtctaccaggctctggttcagtgctgctagacccatatgga
tccaccatctccgagaccaccagcgaggcctggagtgtggaggtcctgcccagcgactca
gaagccccagacctgaagcaggaggagcgtctacaggagctagagagctgctcaggggtg
ggcagcacctccgatgacacagaggtcagagaggtcagctctcggcccagcaccccaggg
ctcagcgtcgtctcagcgacatcagaagacatccccaacaagacagaggacctgcggtca
gagtgcagctcggactttggggggaaggactctgtgaccagtccagatggggaggagtca
tcccatggagcacatcacagtttggcctctccgccctctcaggctgactccttactggcc
atgtttgatcccctctcttccggcgaagattcctccactggtaccatcgtgaggcccaag
gtgcactacgccaggccccttcatcctccccctgaccctcccatcccagagacctgtgcc
ctgggccaggagccccgctactccctgttcacgccccactgcctggcccaagccgagctg
gagcacaccaagcagcgccactcctacacagacaggctggtacgcagccgcagctctgac
attgtgtgcccaggccgccgacccaccagcgacccgggcctgaaccgcagggctgcagcc
gaggagcgggaccatgccggggccttctttatgggtccgttctcgtctcctagcaaggac
tccctgaaaggagaggttgaggagagaaaggacagtgatgaggaaaagtctgatcgcaac
agaccgtggtggaagaaacgctttcagtcagccattcctaaagctccgatagcagcctta
cggaaaagggacaagcaggagaaagacaatatgggccatgaacgtgtcccacaagacgac
cctctgttcaggaactcccaggcccaggcagcagaagacatccttgacaagtacaggaac
atcaagaggaccagtcccagtgaaggagccactgctgcagcctacgacgccacagagttg
tgtggagaggagtgtgtgcacaactcccccagagacgaagctctgcagaacatgtccaca
gacgacctgccagactcagccagccagacagcccagcaacacgattccaacaagttctca
ttcagtgatgcaaagaagaagttgaggctggccttgtgttcagcagagtctgtggccttc
cctctcatggctcctgccaccacacgcaatgggctgcctgaccacacagactttgaagac
aacgagatcgtgtgcttcctgaaggtccagctggcggaggccatcaacctgcaggataag
aaccagatggcccagatccaggagaccacgcgctgcgtcagccgcttcgacacacgcacc
tgcaagaagctgctggctgccattgctgaggattacaggaagcgggcaccctacatagcg
tatctgacgcggtgtcggcagggcctgcagacatcccatgcccacctggagaggctgctg
cagagggtgctgagggacaaggaggtggctaaccgctacttcaccacagtctgtgttcgc
ctcctactggaacacatggaggctaagtccctggacttcatcaaagccttccaggggtgc
acagcgtcagacgacaagacggcggcggtggaggacttcctgcgctacctgtacggggcc
atggcccatgatgcaatctggcagtatgccagcgaggatcagctgcaggatgcccagatg
gccatcgagcgcagcgtcatgaaccgcatcttcaagctggccttctaccccaaccaggac
ggagacatcctgagagaccagcttcttcaggaacacatagcacgtctctcaaaagtggtg
acagcgaatcacaaagctcttcaaatcccagaggtgtatgcgagggaggctccctggccg
tctgcccagtcagagatccggaccatcagtgcctacaagacccctcgggacaaagtgcag
tgtattttacgcatgtgttccaccatcatgaatctcctgagtctggccaacgaggactct
gtccccggagctgacgattttgtccctgtgcttgtctttgtcctgataaaggcaaacccg
ccttgcctgctgtccactattcagtacatcaataatttctacgccagccggctgagtggg
gaggagtgctattggtggatgcagttcaccgcggcagtggaattcattaagaccatcgac
gatcgcaagtga
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