Salvelinus namaycush (lake trout): 120065635
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Entry
120065635 CDS
T07522
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120065635 (ift52)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120065635 (ift52)
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
120065635
NCBI-ProteinID:
XP_038872624
UniProt:
A0A8U1H6F2
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Position
Sna20:1288893..1294119
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AA seq
434 aa
AA seq
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MDKEQRSSVVFNASKRELFTANNGYKSLQKRLRAQWKIQSMKEELSLEKLNGVKLWITAG
PREKFTAAELEVLKQYLDGGGDVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDESVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYQVKEAGKLAVMGSCHMFSDQYLDKEENSKIMDVVFQWLM
GDNINLNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGEENPRDFTSLFDMSLLKLSTN
TLPQVISSYKQMNVKHEPLQLITPQFETPLPQLEPAVFPPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDLDTETRFSPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagcagcgcagcagtgttgtttttaacgcatccaagagagaactgttcaca
gccaacaatggttacaagtccctgcagaagagactcagggcacaatggaagattcagagc
atgaaagaggagctctccttggagaagttgaatggtgtgaagttgtggattactgctggc
cccagggaaaagttcactgctgctgagttggaggtcctgaagcagtacctggatggggga
ggagatgtccttgtgatgctgggtgaaggaggggagatgaagtatgacaccaatatcaac
ttcctccttgaggagtttgggataatggtcaacaatgatgctgtcgtgaggaatgtttac
tacaagtatttccatccaaaagaagcacttgtgtccaatggtgttctgaacagagagatc
agtcgggctgcaggcaaagtggtgacggggatcatcgaagatgaaagtgtcgggaacaat
gcacaggccctcacatttgtgtacccatatggagcgacactgagcgtgatgaagcctgct
gtggctgttctctccactgggtccgtctgcttccccctcaacaggcctgtcctcgccttc
tatcaggtcaaggaggcaggcaaactggcagtgatggggtcctgtcacatgttcagtgac
cagtacctggacaaagaggagaacagtaaaataatggatgtagttttccagtggctcatg
ggtgataacattaatctgaaccagatagatgcagaggaccccgagatcacagattacacc
atgctaccagacactggctgcctgtctgagcgactgcgagtatgcttgcaagagggagag
gaaaatccaagagactttacctccctgtttgacatgtctctactcaaactatcaacaaac
acgttgccccaagtcatcagttcctacaagcagatgaatgtcaaacatgagcccctccag
ctgatcacacctcagtttgagactccccttccacagctggagcctgctgtcttcccgcct
gccttcagggatctgcctccccccatgcttgacctctttgacctggatgaaaccttctct
tctgagaaggtgcgattggcacagctctccaacaaatgcacagacgatgatctagagttc
tacgtgaggaagtgtggggacatcttgggggtgacggggaagttggataaagatcagagg
gatgccaaacacatcctggagcacatcttcttccaggtcgtggagttcaagaagctcaat
caggaacatgatcttgacacagagaccaggttttccccgttctga
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