Salvelinus namaycush (lake trout): 120065637
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Entry
120065637 CDS
T07522
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120065637
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120065637
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Contactins
120065637
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Others
120065637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
120065637
NCBI-ProteinID:
XP_038872626
UniProt:
A0A8U1H8C4
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All DBs
Position
Sna20:complement(1818756..1865939)
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AA seq
1019 aa
AA seq
DB search
MLLPWELLILLSLTDCLAERNTRHGPVFTQEPSDSIFPLRFEDNKVFINCKAKGNPVPHY
KWKVDGRYIDMDLNYNLVEGNLLINNPHATHHGGVYQCIATNVFGTIVSREAKVQFAYLQ
NFSRKPRNTVSVREGQAVVLLCGPPPHNGEIKYSWVFNGRPSFLLQDTRRFVSQRTGNLY
IAKVEASDVGNYTCVVRNMMTNATVYSSPTPVELRRDAVMGEYEPKIEVQFPESLHVTKG
SSVKLECFALGNPVPSITWRRTDGNPLPGKIKINHSNGVLEIPYFRPEDAGVYECVAENS
RGKNVAKGQLIFQSMITHNWVQTLKDVHMAIEANLQWECKASGKPEPVYRWLKNGEPLVL
EDRILVEGGRLAISRINLLDSGMYQCLAENEHGAIYASAELKVVASSPDFSSSPVKKSML
IQRGGEVIMECRPHASPRASISWRRGGEFLKDSTRRTIMEDGTLRISNISESDGGRYTCV
ARNPFGTSSSTATLVVKEPTKITVPPLSVDATVGESIVLPCEVSGDSSLDPTFKWFFNGK
LIDFNRQDHFEMIGGSAGDLMVRNIQLKHSGKYVCMVHTVVDSVSAAAHLIVRGPPGAPE
GLIVGEITDSTAQLSWESGPDNHSPVTTYNIQARTPFSIGWQAVRTVPDSVPGQMFHATV
IDLNPWVDYEFRVVASNNVGVGEPSMQSKQIRTKAAVPEVAPGNVSGGGGRRGELVIQWE
PIPEELQSGEEFGYVVAFRPLGTSTWKQTVLASPDASRYTFRNDSIPPLSQFEVKVGVYN
NKGEGPSSHVVVVYSAEEEPSEPPSRVWTRTLSASEIEVYWEPITQTASSWKIIGYEVLC
WEEGMQDSDAEMVRVTDTAALLSGLKGSTVYLISVRAQNSAGAGPSSPAVNVTTKKPPPS
QPPGNIEWNLTNSKIFLSWEHVKAMGNESEVTGYKVLYRQNWLGKTNVVETNRTSMALQV
PSGEDYLIEIKALSDGGDGSSSGPIRIPKMSSLNSKGHFSSAPCKICAVMFFILSKLTL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgccatgggaactgttaatccttctgtcactcacggactgccttgctgagaga
aacacccgccatggacctgtcttcactcaagaaccaagtgacagcattttccccctgagg
tttgaggacaacaaggtgttcatcaattgtaaagcaaaaggaaacccagtcccgcattat
aaatggaaggttgatgggagatatattgacatggatttgaactacaacctggttgaagga
aacctgttgatcaataacccccatgcaacacatcacgggggcgtttaccagtgtattgct
accaatgtctttggaaccatcgtcagcagggaggccaaggttcagtttgcatatctgcag
aacttcagcagaaagcccaggaacacagtgtcagtgagagaaggccaggctgtggtgctg
ctgtgtggccctccaccccataatggagagatcaaatactcgtgggttttcaacggacgc
ccaagtttcctgctgcaggatacccgccgcttcgtctcccagaggaccggcaacctgtat
atcgccaaggtggaggcctctgatgtggggaactacacgtgtgtggtgaggaacatgatg
accaacgccaccgtgtacagctcgcccacccccgtggagctgcgcagggacgctgtaatg
ggagagtatgagccaaagattgaagttcagttccccgaaagtcttcatgtcaccaaagga
tcatcagtgaaactggaatgtttcgccttaggaaacccagtgccttccatcacatggagg
agaacagatgggaatcccctccctggcaagatcaaaatcaaccattccaacggggtcctg
gaaataccatatttcagaccggaggatgctggtgtatatgagtgtgttgcagagaactcc
agaggaaagaacgttgccaaaggacaactcatattccagagtatgatcactcacaactgg
gtccagacgttgaaagatgttcatatggccatcgaggctaatctccagtgggagtgcaag
gcgagcggtaagcctgaacctgtgtacagatggctgaagaacggggagcccttggtgctg
gaggacaggatactggtagaaggtggacgattggccatatccaggatcaacctgttggac
tctggtatgtaccagtgtctggcagagaacgaacatggcgccatctatgccagcgctgaa
ctcaaagttgtagcctcttcacccgacttctccagcagtcctgtgaagaagtccatgctg
atccagagagggggggaggtgatcatggagtgccgtccccatgcgtcccctagggcctcc
atctcctggcggagagggggagagtttctgaaggacagcacaagacggaccatcatggag
gatggaactctccgtatcagcaacatcagcgaatcagacggagggaggtacacctgtgtg
gccaggaacccctttgggacatcaagcagtactgctactctggtggtgaaagagccaacc
aagataacagttccaccgctgagtgtggatgccactgtgggagagagcatcgtgttgcca
tgtgaagtgtctggagactcctccctggatcccacctttaagtggttcttcaacggcaag
ctcatcgatttcaacagacaggaccactttgagatgataggaggatcagctggtgatctg
atggtcaggaatattcagctaaagcattctgggaagtatgtgtgcatggtacacactgtg
gtggacagtgtctcagcagcagcccacctgattgtcagagggcctcccggtgccccagag
ggccttattgtgggggaaatcactgactccactgcccagctctcctgggagtctgggcct
gacaaccacagccctgtcaccacatacaacatccaggccaggacccccttctccataggc
tggcaggccgtcaggacagttcctgattctgtgcctggacagatgtttcatgcaacggtg
atagatttgaacccctgggtggattacgaattcagggtggtggctagcaacaatgtgggt
gttggagagcccagcatgcaatccaagcagattcgaacaaaagcggcagttcctgaagta
gcaccaggtaatgtgagtggaggaggaggaaggcgaggagaactggttatccaatgggag
ccaataccagaggagctacagagtggagaggaatttggatatgttgtggcttttcgtcct
cttggtacaagcacatggaagcagactgtgctggcttcacctgatgcatcaagatacacc
ttcaggaacgacagcatcccacccctctcacaatttgaggtgaaagttggagtctacaac
aacaaaggagaaggcccgtctagccatgtggttgtagtgtattccgcagaggaagagccc
tctgaacccccgtccagagtgtggacccggacgctgtcagcctctgaaatcgaggtgtat
tgggaacccattacccagacagccagcagttggaagatcattggatatgaggtcctttgt
tgggaggaggggatgcaggatagtgatgctgagatggtgagggtcacagacactgcagcc
cttctctctgggctcaagggcagtactgtgtatctgatctcagtcagggctcagaacagc
gctggagcagggccttctagccccgcagtcaacgtcaccaccaagaaaccaccaccaagt
caacctccagggaatattgagtggaacttgacaaactccaagatctttttgagttgggag
catgtcaaggcaatgggaaatgagtctgaggtgacaggatacaaggtgctgtaccgtcag
aactggcttgggaagaccaacgttgtggagaccaataggaccagcatggcgctgcaagtc
ccctctggtgaggactacctcattgagatcaaagccctgagtgatggaggggatggcagc
agcagtggccccatcaggataccaaagatgtccagtcttaactcaaagggccatttcagc
tcagctccatgcaagatttgtgcagttatgttttttatactttcaaagttgactttataa
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