Salvelinus namaycush (lake trout): 120065719
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Entry
120065719 CDS
T07522
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065719
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120065719
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
120065719
NCBI-ProteinID:
XP_038872731
UniProt:
A0A8U1H8F5
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Position
Sna20:complement(23773387..23838753)
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AA seq
508 aa
AA seq
DB search
MATLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVSTPDVEKRIEE
YKRENPGMFSWEIRDKLLKDGVCDRSTVPSGLFGFLSVSSISRVLRARFGKKDDDDDSDK
KDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
GMPSLPTYQLPECSYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSDGSSPYGLSSNRHSF
SSYSDTFMSQSAASNHMNPVSNGLSPQVMSILSNPNAVPSQSQHDFSISPLHGSLESSNP
ISASCSQRSDSIKGVDSLASSQSYCPPTYSATSYSVDPVTAGYQYSQYGQTAVDYLTKNV
SLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagtgcctcgaatgatgcgccctgcgccaggccagaactac
ccccgcacgggattccctctggaagtatcaacccccctgggccaaggtcgggtgaaccag
ctcggtggagtgttcatcaacgggaggccgctgccaaatcatatcagacacaagatagta
gagatggcccaccatggcatccgaccctgcgtaatctcgcgacagctacgagtttcccat
ggttgtgtctccaaaatcctctgtcggtaccaggagaccggttcgattcgtcccggggca
ataggaggcagcaagcctaggcaggtatcaactccggatgtggagaagcggattgaggag
tacaagcgagaaaaccccgggatgttcagttgggagatccgggacaagctgctgaaggac
ggggtgtgcgacagaagcactgttccttcaggcctatttggttttctctcagtgagctcc
atcagccgagttctgagggcccgattcggcaagaaagatgacgacgacgatagtgataag
aaggatgaagacggggaaaagaaaacaaagcatagcatcgatggcattctcggtgataaa
ggtaatcgtacagacgagggttcagacgtggagtcggagccggaccttcccttgaagagg
aagcagcgtcgaagccgcaccaccttcacagccgagcagctggaggagctggagaaggcc
tttgagaggacacactacccagacatctacaccagggaagagctggcccagaggaccaag
ctcactgaggcccgcgtacaggtgtggttcagcaacagaagggccagatggcgcaagcag
gcaggagccaatcagctggccgccttcaaccacctgttacctggaggcttcccgcccacg
gggatgcccagcctacctacctaccagctacctgagtgctcataccccggcactacactg
tcacaggatggcagcagtacgttacatcggccccaacccctgcctccgtcctccatgcac
cagggcgggctctctgacggcagctccccctacggcctctcatccaatcgccacagcttc
tccagctactcagacaccttcatgagccaatcagctgccagcaaccacatgaacccggtc
agcaacggcctctccccacaggtgatgagcatcctgagtaaccccaacgccgtgccctcc
caatcccagcatgacttctccatctcccccctccacggcagcctggagtcctccaacccc
atctcagccagctgcagccagcgctctgactccatcaagggggtggacagcctggcctcc
tcccagtcctactgtccccccacctacagtgccaccagctacagtgtggaccccgtcact
gccggataccagtacagtcagtatggacagactgcagtggactacctgactaagaacgtg
agtctgtccacccaaagaaggatgaagctgggagaccactctgctgtcctgggactgctg
caggtggagacgggacaggcctactga
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