Salvelinus namaycush (lake trout): 120065784
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Entry
120065784 CDS
T07522
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065784
Membrane trafficking [BR:
snh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120065784
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
120065784
NCBI-ProteinID:
XP_038872765
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Position
Sna21:complement(689672..691525)
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AA seq
615 aa
AA seq
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MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETQLLDLSKNRIKTINMDEFAAYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGANGTRTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SNNADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggctgcccgtcccgctgcgag
tgcaatgcccaggagcgctcggtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcagctgctggacctcagcaagaaccgcatcaagaccatcaac
atggacgagttcgcagcctaccccaacctggaggagctggagctcaacgaaaacaccatc
tcggccatcgagcccggcgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtgtttatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggagaagtgcaacctgacctcggtgccc
accgaggccttcacccacctccacagtttgatctttctcaggctgcgccacctcaacatc
tacgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctaaatctgtcctataaccccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccttactcgttccgaggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcgggcggctcacagtattccccgatggcacccttgaggtgcgctacgct
cagattcaggataatggcacgtatgtgtgtatagccagcaacgccggtggcaacgacaca
tctctcgcccacctgcatgtccatagctactctccagactggcctcaccaacccaacaag
acctttgcattcatctccaaccagcccaatgagaatggtgccaatgggacccgaaccaac
gtccctttccccttcgacataaagaccttaatcatcgccaccaccatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctgtggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcaacaacgcagacgcccctcgcaagtttaacatgaaaatgatttaa
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