Salvelinus namaycush (lake trout): 120065792
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Entry
120065792 CDS
T07522
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065792 (irx5b)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120065792 (irx5b)
BRITE hierarchy
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PGA2
Motif
Other DBs
NCBI-GeneID:
120065792
NCBI-ProteinID:
XP_038872774
UniProt:
A0A8U1H6K1
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Position
Sna21:complement(35535235..35537298)
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AA seq
447 aa
AA seq
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MAYPQGFLFQPSVSLALHSCPPFSSSVILGRPRTDEMGRPSSGSAFAPYAGSPAFNGSSP
GFNSYLQYSGEQRAAMNSFVGSAYDPSAGITGSLEYHPFGGALGPYPYGDPAYRKNATRD
ATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWNPRN
RSEDEEEDDNIDLEKNDDDDEPLKPTAEIGSKNEADGHHPYPVGISREKEDNSSNDMEPV
LTDPDLKDHGDRRVPEMLGPTTTASPQNVHLGAERDSDSADTASPPAPRRNDTGNSSNAT
SVIDSPLPAPKPKLWSLAEIATSSDKCKGCSDGAQNVPRQLRTEIPARVSSPPRAALQNH
FPHSAALSRHVYYTSPFFQGYSNYHGAFGQLHSPGSNVGSATHLNGLHQTMLHRAEALAR
DSQARSQTQIDLCKDLRYELKKGMTHV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcaaggctttctcttccaaccgtcggtttctctggctctccattcctgt
cccccgttcagttccagtgtgattttaggaagaccgaggacagatgaaatgggccggccg
tcttcagggtcagccttcgcgccgtacgcgggatcaccggcgttcaatggctcatcgcca
ggcttcaactcttaccttcagtacagcggagagcagagggcggcaatgaactcgtttgtg
ggttccgcgtatgatccttcagccggcatcactggctctttagaatatcacccgtttggt
ggtgcattgggcccctatccatatggcgaccctgcatacaggaaaaatgcaacacgggat
gcgacttccactctcaaagcgtggctcaatgaacatcgcaaaaacccttaccccaccaag
ggcgagaagatcatgctggcaatcatcaccaagatgacccttacccaagtgtccacctgg
ttcgctaacgccagaagacgtttgaagaaagagaacaaaatgacgtggaacccgaggaat
agaagtgaggatgaggaagaggatgacaacattgacctggagaagaatgacgacgacgac
gagccactcaagcccacagcagaaattgggtcgaaaaatgaagcagatggacatcatcca
tatccagtgggaatctcccgtgagaaagaggacaatagcagcaatgatatggaacctgtc
ttaactgatccggatttaaaggaccatggggacaggagagtgcccgagatgctgggtccc
actaccacagcatctcctcaaaacgtgcaccttggagcggagagggattcagactcagcg
gacacggcaagtccacctgcaccgaggcgtaatgacacaggcaactccagcaatgccacg
tcagtgattgactcgccccttccagccccaaaacctaaactgtggtcgctggcggagatt
gcaacttcttccgacaaatgtaaaggatgtagcgatggtgcccagaacgtgccccgacaa
ttgcgcacagagattccggcccgtgtgtcatctccaccgcgagccgctcttcagaatcat
ttccctcacagcgcagccctttcaagacatgtctattatacatctccctttttccagggt
tactcaaactatcatggcgcttttggacagctgcacagccccggatccaacgtggggtca
gcgacacatttaaatggattacatcaaactatgttacacagagccgaggctctggcaaga
gacagccaagccaggagccaaacacagatagatctttgtaaagacttgagatatgaactt
aagaaaggtatgacacatgtttag
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