Salvelinus namaycush (lake trout): 120065799
Help
Entry
120065799 CDS
T07522
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120065799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120065799
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120065799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120065799
NCBI-ProteinID:
XP_038872781
UniProt:
A0A8U1FAU2
LinkDB
All DBs
Position
21:complement(18096429..18111086)
Genome browser
AA seq
614 aa
AA seq
DB search
MESLPKMDPSNDHSRPLDIVPQSDEKMKERGQWGNKVEFVLSVAGEIIGLGNVWRFPYLC
YKNGGGAFFIPYLIFLFTCGIPVFFLETALGQFTSEGGITCWRKITPLFEGVGYATQVIV
ALLNFYYIIVLAWAIFYLSYSFTWDLPWASCNNTWNTDSCMEFQRRNGSFNQPRLNATSP
VIEFWERRVLRISSGIDHIGSLNWDLVLCLAIAWVLVYFCIWKGVKSTGKVVYFTATFPY
IMLSILLIRGVTLPGAFIGIKFYLYPDLGRLSDPQVWMDAGTQIFFSYAICLGCLTALGS
YNKYNNNCYRDCLALCFLNSGTSFVAGFAIFSILGFMSYEQNVPISEVAESGPGLAFIAY
PRAVSMMPFSPLWACFFFIMIVFLGLDSQFVCVESLVTAMVDMYPKTFRRKNRRELFILA
VAVVSFLMGLIMLTEGGMYVFQLFDYYAASGTCLLFVAVFETVCIAWIYGADRFYDNIED
MIGYRPGPIIKYCWMFFTPATCLGTFAFSLIKYTPLKYNNEYVYPWWGYCLGWLLALSSM
LCVPLWVVIKMCSVEGTLKERFTILTTPSTDLPKTKKEQEKLLAIFPGDGDSLRQRHPPT
KEGYFPYNEKESNC
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagagcctgcctaagatggacccctccaatgaccacagtcggccgctggacattgtg
ccgcagagtgatgagaagatgaaggagaggggccagtggggaaacaaggtggagtttgtc
ctttctgttgccggggagatcataggactgggcaatgtgtggcgcttcccttacctgtgc
tacaagaacggaggaggtgctttcttcatcccctacctcatcttcctgttcacctgtggg
ataccagtgttcttcctggagacagccctgggacagttcaccagcgagggaggcattacc
tgctggaggaagatcactccactgtttgaaggagtgggctacgccacacaagtcattgtg
gctctgttgaacttctattacatcattgtcctggcctgggccatcttctacctgtcctac
tccttcacctgggacctgccctgggcctcctgcaacaacacatggaacacagattcctgc
atggagttccagaggaggaatggctctttcaatcagccacgtctgaacgccacgtctcct
gtcattgagttctgggaacgaagggttctgcgtatctcctctggcatagatcatatagga
tctctcaactgggacctggtgctgtgtctggcaatagcctgggtactagtctacttctgt
atctggaagggagtcaagtccactggaaaggtggtatatttcacagctaccttcccctac
atcatgctgtctatcctgctcatcagaggggtcaccctgcctggagccttcataggaatc
aagttctacctctacccagacctgggccgcctgtcagatccacaggtatggatggatgca
gggactcagatcttcttctcctatgccatctgtctggggtgtctgactgctctgggaagc
tacaacaagtacaataacaactgctacagagattgcttggcgctatgcttcctgaacagt
gggaccagctttgtggcaggctttgccatcttctccatcctgggcttcatgtcttacgag
cagaatgtgcccatctcagaggtggcagaatctggtcctggtctggccttcatagcctac
ccccgtgcagtgtctatgatgcccttctctcctctctgggcctgtttcttcttcatcatg
atcgtctttttgggtctggacagccagtttgtgtgtgtggagagtctggtgacggccatg
gtggacatgtaccctaaaacatttcgtcgtaagaaccgcagagagctcttcatcttggcg
gtggccgttgtctccttcctcatgggtctcatcatgctgacagagggaggcatgtacgtc
ttccaactctttgactactatgctgccagtgggacgtgcctgctctttgtggctgtcttt
gagactgtttgcattgcttggatttatggtgctgaccgtttctatgacaacattgaggac
atgattggctaccgtcccggacctattatcaaatactgctggatgttcttcactcctgct
acctgcttaggtacctttgccttctccctgatcaagtacacccctctgaagtacaacaat
gagtatgtgtacccttggtggggctactgcctgggctggctcctggccctgtcctccatg
ctctgtgttcccctctgggtggtcatcaaaatgtgttctgtggaaggcaccctgaaagag
cgctttacaatcctgaccacaccatccactgacttacctaaaaccaagaaggagcaggag
aagctgctggccatctttcctggcgatggggacagcctccgtcagagacaccctcccacc
aaggaaggctacttcccctacaacgagaaggagtccaactgctag
DBGET
integrated database retrieval system
