Salvelinus namaycush (lake trout): 120065829
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Entry
120065829 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04137
Mitophagy - animal
snh04144
Endocytosis
snh04340
Hedgehog signaling pathway
snh04350
TGF-beta signaling pathway
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120065829
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120065829
04350 TGF-beta signaling pathway
120065829
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120065829
04137 Mitophagy - animal
120065829
09144 Cellular community - eukaryotes
04520 Adherens junction
120065829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065829
04121 Ubiquitin system [BR:
snh04121
]
120065829
03029 Mitochondrial biogenesis [BR:
snh03029
]
120065829
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120065829
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120065829
Autophagy
Mitophagy
Other mitophagy associated proteins
120065829
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120065829
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120065829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
120065829
NCBI-ProteinID:
XP_038872808
UniProt:
A0A8U1H707
LinkDB
All DBs
Position
Sna2:63524437..63591226
Genome browser
AA seq
796 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPTGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNSSRVAMESQSQNTNLSSRQSNQLKEQQAPPQVPVLSPAQLPEEAECLTVPKYKRDL
VQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGL
DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
AVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE
HNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQH
LLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRARLL
QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEHYDKLY
DKLLTAIEETCGFAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggttatcagagactggacctgaacaagctgggccccaatgacaatgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgatggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagccccaccgggcggcccctcagctgtgtggtg
gatgagaacacgccggtcatgacacccaacggggcggccatcggtgtgcttcccagcagt
ggcagtgacccgcgggtccaagagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatatgagcaaagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccaggc
tgggagatccgcaacacggcaacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacagttcccgcgtggccatggagagccagagccagaacactaacctcagt
agtcgtcagtcgaaccagttgaaggagcagcaggcccccccgcaggtcccggtgttgtcc
ccggcccagctccccgaggaggccgagtgcctcaccgtgcccaagtacaagagggacctg
gtccagaagctcaagatcctccggcaggagctgtccaatcagcagccccaggcaggacac
tgtcgcatcgaggtctgccgcgaggagatctttgaggagtcgtaccgccaggtgatgaag
atgcgtcccaaggacctgtggaagagattgatggtcaagttcagaggagaggagggcctg
gactacggaggagtggccagggagtggctgtacctgctgtcccatgagatgttgaacccc
tactacggcctgttccagtactccagagacgacatctacaccctgcagatcaacccagac
agcgccgtcaacccggagcacctgtcctacttccactttgtgggtcgtatcatgggcatg
gcggtgttccacggccactacatagacgggggcttcaccctgcccttctacaaacagctg
ctggggaaacccatcaccctggacgacatggagtcagtggacccagacctccacaacagc
ctggtctggatcctggacaatgacatcacgggggtgctggaccatacgttctgtgtggag
cacaatgcctacggagagatcatccagcacgaactgaagcccaacggcaagactgtctct
gtctccgaggacaccaagaaggagtatgtcaggctgtatgtgaactggaggttcctccac
ggcatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccccagcac
ctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctggggaagatc
gacatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagcaacgtg
gtcaagtggttctggaaggccgtggagtcctacgacgaggagaggagggccagattgctg
cagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaaggtgcc
gcggggccaaggctcttcaccatccaccagatcgatgccaacaccaacaatctacccaaa
gcccacacctgctttaaccggattgacgttcccgcctacgagcactatgacaagctgtac
gacaagctgctgacagccatcgaggagacgtgtggctttgcggtggaatga
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