Salvelinus namaycush (lake trout): 120065830
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Entry
120065830 CDS
T07522
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065830
Membrane trafficking [BR:
snh04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120065830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
New_glue
DUF445
Motif
Other DBs
NCBI-GeneID:
120065830
NCBI-ProteinID:
XP_038872805
UniProt:
A0A8U1H935
LinkDB
All DBs
Position
Sna21:complement(25969017..26008431)
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AA seq
1692 aa
AA seq
DB search
MAGNTDISYSLQEHITQLLKPQKICLMRQVQLNQPKGKAESRVLVSRHLMFPGSNKSLWT
SVSPTHPPSLSLSSRHLPFHVLTCVSQYTFSVFVSVLHCCPQSGLSLQVESSFSYLEIYA
ISIESLNQVVIETDRQTYSLSLTSVEDLEAMVSHVTASLKKIFPDSSPGKILKKIPPDLQ
ERMWNLATRVEEHLTGTLGPCGGFSETYAALCDFNELPCREEVQWDVDNIYYVQNCREFN
LLDFSHLENRDLALSVAALSFNQWFTKISSKDLKLSSEVQEQVLFMINRSSTLEEVCLEG
CGIKLDFAVKMACALRDHTCSAIHTINLSANHIEDKGVIALSQELENLPNGLTQLSLSRI
SVSPKGLGSLTQALRQNKAFSSSLCHLDLSGNTGILATEEAVNLFKFLSGTNAVSYLDLS
GTDCPLDTLFVSLSAGCCPNLAYLNLSRNPFSHRKVREVTRTVKEFFSKSNELRYVGLAG
TKLPPEALRLLLQGLATNTHLCGLELDLSGCELRSAGAQVIQEHIFEAKAISSLDLSDNG
FESDMVTLVLSIGRSHSIRHLALGRNFAMKSKALTDVLQRIVQLIQEEECPLESLSVCDS
KLKTGTTILINSLGCNASLTKIDISGNCIGDTGAKMLAKALLINTKLRTLVWDRNNVTAR
GFLDVANALERNFTLQHISIPMNDVTHGYRNSPEKTEEALQKIQSCLIRNSQRKSAGPDQ
ILNLQQGLKTVRSEQLVQGLCQRLQESVRPLAPCNIQEVQSDILAAEEVLHNTKTSIMLL
PSLYDLVKTPSSGAMLQHILNDTAKTVTNEITEEIQELAQALLQSAQTLCPRVTHRSSVC
EQLADCVAKKSRQTALFIQDTFMQHIGELISNKLSELKLSVSVSLVESIIDEVLLDLSVA
QQKLDRHMREQTTSGLKTNVPHLRVVDHDFPMDDYVPVIWRSSIHSKSIRPAPSVKSLLD
VDTEQQARESMHYQQEGAWVGGKVQALSSTTTLSVTVGGQLKSEGPSHTGREADAAAAPA
PAAAAALSNSEPRRPEPAPPQAPMDLPIDGHTLRHYTRSRPRPNRRNSKPPSKTQEQAAE
REENEANETIGRVDEGVEEFFTKKIIPDDPLKAQREEIPDKAQPTESTSPAPPSTSAPAP
PSSTTTSSSTSSSSATETTTLSTAPSKNIKKKFGDFFAFKKGRAVRGSKGEVCPEGKVKK
TSIADLIRPLREAKEKEKERERDKKGKFEEERGANATSVNDSDATTTVRAAEDNTMAPAT
PSDVATTSASLPTSARAQEKVTPMSPSALTPSPVISPIGGFLVEREKSRTLEKSRTPDGE
RRLKATRRSLRDGKSQSLILLTGLEDGTATHGKKHASESTSSLEQRLHVMLHRMGVAKTP
PADTKTSQNKEEELRKANSEGAILDKKPEPPTTLMKPRTMSTSASDTRWPIRAGLTPLEA
LRTDKPLLPGRPIGPLSPKPTVAAKPPLPAPQQPPAAARTSLGFPRQPSKATGPETQRTE
PEPSQSQTQPQQREPPCPSPRKETPPAPSPRRGPSALESRERSERAQSVTEETLPKPRPR
MKPSPQRRAVSVYDDSLLREHAALLDHEELKATLPRLQRSPAQKRANPGELPTCSEDQPE
GKDAGEAEEERTGEGMDSWPITEDKPGPSPVGTSQGESTVEKRGETVSQQHTAQAETSDQ
RTEPPLPETHMD
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaatactgacatctcttacagcttgcaagagcacatcactcagctgctgaag
ccccagaagatttgtctcatgcggcaggtgcagctaaaccaacccaaggggaaggctgag
agcagggttctggtgagtaggcacctcatgttccctgggtccaacaaatcactgtggacc
tcagtctctcccactcaccccccctctctttctctctcttcccgtcaccttccctttcat
gtattaacctgtgtgagtcagtatacattctctgtgtttgtatcagtgcttcactgttgt
ccacagtctggtctctccctgcaggtggaaagctccttcagctatttagagatttatgcc
atcagcattgagagtcttaatcaggtggtgattgagacggacagacagacctactctctc
agtctgacatctgttgaggaccttgaggctatggtcagtcatgtgacagcttctctgaag
aagatcttccctgattcatctccagggaagatcctgaagaagatccctccagacctgcag
gagcggatgtggaacctggcaacccgggtggaggagcacctgactggaacactgggacca
tgtggaggcttctcagagacgtatgctgctctatgtgacttcaatgaattaccctgcaga
gaggaggtccaatgggatgtggacaacatttactatgtccagaattgtcgggaattcaac
ctcctggatttcagtcatctggaaaacagagatttggccttatcagtggccgcactttcc
ttcaaccaatggttcaccaagatctccagcaaagacctcaaactgagctcagaggtccaa
gagcaggttctcttcatgatcaacagatcctccaccttggaggaggtgtgtctagaggga
tgtgggatcaaactggattttgcagtgaagatggcctgtgccctgcgagatcacacctgc
tccgccatccacaccatcaacctgtcagccaatcacatagaggacaaaggtgtgatagct
ctcagtcaggaactggagaatctgcccaatggtctcacccagctgtccctctccaggatt
agtgtctctcccaaaggtctaggtagtctgactcaggcgttacggcagaacaaggccttc
tccagctctctgtgtcacctggacctgtcagggaatacaggcattctggctacagaggaa
gctgtgaacctgtttaagttcctgtctgggaccaatgctgtatcttacctggacctgagt
ggcacagactgccctctggacactctgtttgtatctctgtcagcaggctgctgccccaac
ctggcctacctcaacctgtccagaaaccccttctcacacaggaaggtgagggaagtgacg
aggactgtaaaggaattcttcagtaagagcaatgagctccgatacgttggattggcagga
accaaactacccccagaggctctcagattgttgttgcagggtcttgccacaaatactcat
ctgtgtgggctggagctagacctgagtggctgtgagctgaggtctgctggcgcccaggtg
attcaggagcacatctttgaagccaaggccatcagcagtctggacctttctgacaatggt
tttgagagtgacatggtcaccttggtgctgtccatcggtcgtagtcactccattcgccat
ctggctttgggacgcaactttgcaatgaagtccaaagctctaacagatgtcctacagcgt
atcgtccagctcattcaggaggaggagtgtcccctggagtctctgtcagtgtgcgactcc
aagctgaagacaggcaccaccatcctcatcaacagcctgggttgcaatgccagcctcact
aagatagacatcagtggcaactgcatcggagacactggagccaagatgctggccaaggcc
ttactcatcaacactaaactcaggactctggtctgggacaggaacaatgtgacagccagg
ggatttctggatgtggccaacgctctagagaggaacttcacactgcagcacatatccatc
cccatgaatgatgtcacacacgggtatcgtaacagtcctgagaagacagaggaggctctg
cagaagatccagtcgtgtctgatcaggaacagccagagaaagtctgcaggcccagaccag
atactaaacctccaacagggcctgaagaccgtacgctctgaacagctggttcaaggtctg
tgtcagaggttacaggagagtgtccgacctttagccccctgcaatatacaggaagtacag
tcagacatattggctgcagaggaagtgcttcataatactaaaacctccattatgctattg
ccttcactttatgatctggtgaagacaccctctagtggtgcaatgctgcaacacatactg
aatgacacggccaaaacagtcaccaacgaaataacagaggagattcaggagctggctcag
gccttgttgcagtcagcccagaccctctgtcctagggtcacccacaggtcaagtgtctgt
gagcagctggctgactgtgtggctaagaagtccagacagacagccctgttcatccaggac
accttcatgcagcacataggagaactcatcagtaacaaactaagtgaactcaaactgtca
gttagtgtctccttggtggaaagtatcattgatgaggttctgctggacttgtctgtggct
cagcagaaattggaccgtcatatgagggagcagaccacctctggactcaaaaccaacgtc
cctcatctacgagtggtagaccatgacttccccatggatgattatgttcctgtcatttgg
aggagcagcatccactccaagagtatccgtccagccccctcagtgaaaagtctcctggat
gtggacacggagcagcaggcaagagagagcatgcattatcagcaggaaggagcatgggta
ggagggaaggtgcaggcgctgtcgtcaacgacgacactgtcagtcacagtaggaggccag
ctgaaatccgaaggcccctcccacacagggagagaggcggatgctgccgctgctcctgct
cctgcagctgctgcggctcttagcaacagtgagccccggcgccctgagcccgcacctcct
caggcccctatggacctgcccatcgacggccacacactgaggcactacacccgctccagg
cccagacccaaccgccggaacagcaagccgcccagtaagacccaggagcaggcagctgag
cgtgaagagaatgaagccaatgagaccattggcagggtggatgagggagtagaggagttc
ttcactaagaagatcatccctgatgaccctctaaaagcgcagagggaggagatccctgac
aaagcacaacccacagagtcaacttcccctgcccctcccagcacgtctgccccggcccca
ccctcctccaccaccacctcctctagcacgtcttcctcctccgcgactgaaacaaccacc
ctttccaccgccccctccaaaaacatcaagaagaagtttggggacttctttgccttcaag
aaaggccgtgccgtccgggggtcgaagggcgaggtttgcccagagggcaaggtcaaaaag
acctccattgcagatctaatcagaccacttagggaggcaaaagagaaggaaaaagagagg
gagcgagacaaaaaggggaaatttgaagaggagaggggtgctaatgccaccagtgttaat
gattctgatgccaccacaacagtaagagcagcagaggacaacaccatggcccccgccact
ccctctgatgtcgccaccacctccgcctccctgcccaccagtgcccgtgcccaggagaag
gtgacccccatgtcccccagcgctctgacccccagccccgtcatcagccctattgggggg
ttcttggtggagagggagaagagccggactctggagaagagcagaaccccagatggagag
aggaggttgaaggccacacggcgctccctcagggatggcaagtcccagtccctcatcctg
ctgacaggcctggaggatggcactgccacacatggaaagaaacacgcatctgagagcaca
tccagccttgagcagcgtctccacgtaatgctccaccgcatgggggtggccaagacacct
cctgcagacacaaagaccagccagaacaaagaagaggagctgaggaaagccaactcagag
ggtgcaattcttgacaaaaaacctgaacctccaaccacgttgatgaagcctcgcactatg
tccacatcagcttcagacaccaggtggccaatcagagcaggcctaactcctctggaggct
ctccgaacagataagcccctcctcccaggacgtcccatcggccccctctctcccaagccc
acagtggcagccaaaccccctctccctgccccccagcagccccctgctgcagctaggaca
tccctggggttcccccggcagccaagcaaagccacaggcccagagacccagcgaacagaa
ccagagccctcccagagccagacccagccccagcagagggagcccccctgcccctccccc
cgcaaggagactccccctgccccatcgccacgcaggggaccctctgccctggagagcagg
gagcgctctgagagagcacaatcagttactgaagagacccttcctaaaccccggccccgc
atgaagccctctccccagcggagagctgtgtctgtctacgacgactctctcctccgagaa
catgctgctctgctggaccatgaagagctgaaggcaacattgccccggttgcagaggtca
ccagcccagaaacgtgccaaccccggggagctccctacctgtagtgaggaccagcctgag
gggaaggatgcaggtgaagcagaggaggagaggactggcgaggggatggacagctggcca
ataacagaggacaagccagggccaagcccagtggggaccagtcagggagagagcacagta
gagaagaggggagagactgtctcacagcagcacacagcacaggcagaaacatcagaccaa
agaactgaaccccccttaccggagacacacatggattga
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