Salvelinus namaycush (lake trout): 120065875
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Entry
120065875 CDS
T07522
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120065875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120065875
03016 Transfer RNA biogenesis [BR:
snh03016
]
120065875
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
120065875
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120065875
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120065875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
ParcG
TOR1L1_N
MRI
Motif
Other DBs
NCBI-GeneID:
120065875
NCBI-ProteinID:
XP_038872848
UniProt:
A0A8U1FBG6
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All DBs
Position
Sna21:complement(35824741..35853205)
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AA seq
565 aa
AA seq
DB search
MVSFCGICPSQHCPQFRSEVFLGQCSRGCGKICISYQSTHGGMGWYSSCPPSGVGLNGIC
ISNPPRPPCWGSQSALDETPLLFCSLRLNVLLTKTRNYAVGILGLHEEIQDFYAYMSPRP
EEEKMRREVVERIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFVKFREGDTLPLW
RLEEALRKHKVVEENSVKVLDKATVPIKLTDSLTEVKVDISFNMKNAVKAAALIKDYKKK
YPVLPYLVLVLKQFLLQRDMNEVFTGGISSYSLFLVAVSFLQLHSRENACSPNANTGVLL
IEFFELYGRHFNYLKTGIRIKDGGCYLSKDEVQKSMLDGYRPSLLYIEDPLQPGNDVGRS
SYGAMQVKQVFDYAFMVLSHAVSPIAKYHFNNHGESILGRIIRVTQEVAEYRDWITMKWA
ALSLNSLALKGNVTLLVEVQEMEKCINNLSEEGAESPSSSSPPPSLSFSSPHSSSASSND
AARLICTQCWIDQSQGYKFLFQQPRKPVEQEHGGQSEFDVLSEQPCQQTAKHRNRTVIRQ
QQQEPPRQKAELSWQEEETPAKAPM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgttctgtgggatatgcccttctcaacactgcccacaattccgctcggaagtc
ttcctgggccagtgcagccggggctgtggcaagatctgcatctcttatcagagcactcat
ggtggtatgggttggtattcttcatgccctccgtccggagtgggcctcaacggcatctgc
atctccaaccctcctcgtcctccatgttggggatcccagtctgccctggacgagacaccc
ctgctgttctgttccctgagactaaacgttttactaacaaaaaccaggaactacgctgta
gggattttggggctccatgaggaaatccaggacttctatgcctacatgtctccgcggccg
gaggaggagaagatgaggagggaggtggtggagaggatagagagggtcattaaggacctt
tggcccactgctgacgttcaagtatttggaagtttcagcacgggtctctatctacccacc
agtgacattgacctggtggtgtttgtgaagttcagggaaggagacaccctccctctgtgg
aggttagaagaggcgctgaggaaacacaaagtggtggaggagaattctgtcaaagtgctg
gacaaggccacggtgccaatcaaactgacagactctctcacggaggtcaaagttgacatc
agtttcaacatgaagaatgctgtcaaagctgctgccctcatcaaagattataaaaagaaa
tatcctgtgcttccgtacctggtgctagtcctgaagcagttcttattacaaagagacatg
aatgaagtgtttacaggaggcatcagttcctacagcctcttcctcgtcgctgtcagcttc
ttacagctccatagcagggagaacgcatgcagtcccaacgccaacactggtgtcctactc
atagagttctttgagctgtacggccgccattttaactacctgaagacggggatccggatc
aaggacggaggctgctacctctccaaagacgaggtccagaagagcatgctggatggatac
agaccttccctgctctacattgaagacccactgcagccaggtaatgatgtgggccgtagc
tcatacggggccatgcaggtgaagcaggtgtttgactatgccttcatggtgctgagccac
gctgtgtcgcccatcgctaagtaccacttcaacaaccacggcgagagtatactgggcaga
atcatccgggtgactcaggaagttgctgaatacagagactggatcaccatgaagtgggct
gccctatcactgaactccctggccttaaaaggtaatgtcacgttgctggttgaggttcag
gagatggagaaatgcatcaacaatctctctgaggaaggggcagagtcccccagctcctcc
tctcctcccccctctttgtcattctcctcgccacattcttcttcagctagctccaatgac
gctgcgaggctcatctgcacccagtgctggattgaccaatcacagggatacaagtttctc
ttccagcagccgcgtaagccagtcgaacaagagcacggtggacagagcgagtttgacgtc
ttgtcagaacagccatgccaacaaacagccaagcacaggaacaggacagtcatcaggcag
caacagcaggagccaccgagacagaaagcagagctgtcctggcaggaggaggaaacccca
gccaaagcaccaatgtaa
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