Salvelinus namaycush (lake trout): 120065892
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Entry
120065892 CDS
T07522
Symbol
lrrk2
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120065892 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065892 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120065892 (lrrk2)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120065892 (lrrk2)
Protein kinases [BR:
snh01001
]
Serine/threonine kinases: TKL group
LRRK family
120065892 (lrrk2)
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
120065892 (lrrk2)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120065892 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
Roc
Ras
COR-B
COR-A
LRR_14
Arf
Beta-prop_RSE1_2nd
LRR_9
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
LRR_R13L1-DRL21
LRR_13
Ank_3
LRR_NXF1-5
LRR_6
Kdo
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120065892
NCBI-ProteinID:
XP_038872864
UniProt:
A0A8U1H6M8
LinkDB
All DBs
Position
Sna21:37866592..37963253
Genome browser
AA seq
2546 aa
AA seq
DB search
MVNKEELEERLKKLLVRLKNQQEGKQLSTLVQIIQDLLFLAHTDDCAELFEDKDVHGPLM
LVLSTYSNSRGVQQVGWSLLCRLMEICPSTLDSLVRPLGAGIDWEVLGVHQQILKVLSQH
SGDCRVMMVGLRALALLLRSDVIVLLIRDEEEDVFSLIVEGMKTFPSSEEVQIQGCRGLQ
LLLDRVSDDDLVEFLENQDHSVVLGALHRFHDSEDLFLQAMKVLLPLAGPASNVEILMSG
GERCYSVVAGAMESFPEVEALQEVGCCLFRKFTSERYCSILVLNGVHRVTVRACLTYPEN
ATLQAAALSCLAALTQTIVKSKAVVNEGMEEGEAEENRGKEEAVDDVGLCWMEACCRALE
VHAADSTVQEAACWAIHSLLLHGSESWHHSTEEQDGRTPVHRQIMAAMLLHSSSPGVFQA
AASAMGTLITYNSKMRSLLLSNGLHVNVVEMMKRHLSSPEVSAGGCKLLHLLFKGRTASL
DELNMAMGQILRTMKVHNFIPEVQLEALRASLAFLCPDRSLRVSDHGVSVADPDTVDVSL
RVQKNQSVVEGAHTVYLETLNRFISSAAIQECGLRVLSALADCSGAVDLLCQQGAIDTVL
HTLQMFPREREIHYWGLNLLYCLVSKKKLSRMIVPVLASVLVTSLLQYREDTEMLLKGFQ
VALRMLDACSGAAGELQREGFDREIFLQLKEGPPDRCSYPLSQLRKAACLALSKMCGDAE
LKYSMLEKACKDGDVLMAECLIQLGADINKKTKTESLIYQVCEQGGPLQLVVLLLSRGVH
EQHLRGALGASVRRGDGPAVIQLLGRLGLDLNNNALCLGGFRLGRVDAAWLSPLLSERGR
VSSLRSSTSKGACLARYVLSFQRGKTTPTPSTPRSLADPCLTSGYMSDESDDSSFLSLED
SLVFNDDMESDGEDHETHRTALLKGTLSVSRMKKLWRRMSSLXRTASEGVQGEVELNEPL
QRRYGIHSPVLSSGYNSSPLVGDREWIRLLDLSGNELDSVSCLLDEGSVRQQLEHLYRLD
LSQNSLSEFPSGLCESLKSLTRLDLQGNQLQSLPAELLALPSLSMLNVSRNCVGPLLTLD
PAVTCPSLRQLNLSYNHITTFPHQLGRAMERLEELSLEGNRMGELWSPLCLPEMKLLDIS
KNIVESISHDFLSGCPKLENFSACTNQLSSLSHLPSKITTLKLSHNSFTTIPQAVLDLPN
LRSVDMRTNDIRVLPGPCAWASVNLRELMFGQNRIGVLDLSGPEVYKWARLEKLHLSDNK
LTEVPPQIGLLEELTSLDLSRNGGLRSFPDEMGKLSRLWDLPLDGLRLSLDLKHIGNKTK
DLVRFLQQRLKKAVPYYRMKLIVVGNADSGKTALIRQLMKLKRSQWQMEQPTVGIDVRDW
TIRDRDKKNMVLNVWDFSGGEEFSGSHPHFLTPRALYLVVYDLSKGAAQVDALKPWLFNI
KAVAPLSPVILVGTHTDVSEDLQLQACLDKIRQELLNHQGFPAIRDYHMVAVCEDSDTIG
RLRKAIAREVASFKIQGQLVMGQLVPESYLELERRVLLERTRVPGEFPVLRHQYLLQLIQ
ESQIQLEEAELPHAVHFLSEAGVLLHFDDPALQLRELYFIDPQWLCNIISQKLSLKSSGF
WENPKGVVQRSMVERFLFESKCFPKRHLTQYFKLLEKFQIALPFGEDQLLVPSSLSKHRP
VIEMPHCENSEVIVRLYEMPYFPMGYWSRQINRLLEVSSYMLCGRERELRPNRIYWRRGI
YLSWSPEAYCLVEAANVEDNPASFVKITVPCSRKGRVLLGQVVDHVDSLLEEWFPGLLTT
DIHGNGETLLKKWALYSFKDGQEWSKILLEDLFTHIDKDCLLVNPEDPRCTVPISQIAPD
LILSDQPAGIILDSEELEMDLTKENLLGDGGFGSVYRGIYKNEEVAVKIFNKHASDLYIH
RLLRQELVVLGRLHHPSLVGLLAAGAAPHLLVMELAPRGSLDSLFEHENSSLNRKLQHRI
ALQVADGLRYLHSSMIIYRDLKPHNVLLFNLKTDSETIAKITDYGIAQCCCSMGVRSSEG
TPGFRAPEVARGNVIYNQQADVFSFGLLLYDLLTCGERISDGMKFPSEFDEIAVQGKLPD
PVKHHGCSPWPGFQGLMKDCMRENPQDRPTSTQVFERLNSGEMLCLMRELVVSRAANAEC
FTAGCSSASNGPSSNPRAWVGGGSSTQRLGCVASVDLETEKVTTQVIDTSPVLCLVTVQV
PDEACDWLVAGTQSGALVVISTQNLSNWHNLQSVTDAVTSLFFHTHPQRSQRKNYLLVGT
ANGILTVYEDSALQVENGQPVKTLHIGNVNTPVMCLGQSGHSLDRTTVWAGCGSRILSFT
ADYGVCKTIDTKPNSLFQQHHAVSSEPCVSRMVVEKHVYLSKAGGQSVEVWNKKSERMID
SIDCSQLLRHNSSRRPRKANSEFEFGADSPTWANIKSLLVQQTTLWIGTRGGHLLLVELA
NLQLLQVISPHCQSIRSMASVFIETLNRKNVVLVLGRRLSQDKNQYDEESVLMVWNSSLP
LEVKDLNKHCEMREEITAKMREQQND
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaaggaggaactggaagaaagattgaaaaaactattagtgagactgaaaaac
caacaggaggggaagcagttgagtaccctggttcagatcatccaagaccttcttttcctg
gcgcacactgatgactgtgcagaattatttgaggataaagatgtccatgggcctcttatg
ttggtgttgtcaacttacagcaacagcagaggggtgcaacaggtgggatggtcgttgctg
tgtcgactgatggagatatgtccttccaccttggactcactggtcaggcccctgggagca
gggatagactgggaggtacttggagtgcatcagcagatccttaaggtgttgtcccagcac
agtggagactgcagagtgatgatggttgggctcagggcactggctctgctcctcagatca
gatgtgatcgtgttgttgattcgggatgaggaagaggatgtgtttagtttgatcgttgag
gggatgaagactttcccctccagtgaggaggttcagattcagggctgccgtggtctccag
ctgctactggacagagtgtctgatgatgacctggtagagtttctggagaaccaggaccac
agtgttgttctaggtgctctgcaccgttttcacgacagtgaagacctgtttctgcaggcc
atgaaggtactccttcccctagcaggtcctgccagtaacgtggagatcctgatgtcgggg
ggagagaggtgttacagtgtggtggctggagccatggagtcgttcccagaggttgaggca
ctgcaggaggtcggctgctgtctgttcaggaagtttacatcagaaagatattgtagtatt
ctggtgctgaatggggtgcatagggtcactgtaagagcctgtttgacttaccctgagaac
gccactctacaagctgctgcgctctcctgtctggctgccctcactcaaaccatagtgaag
agcaaagctgtggtgaatgaagggatggaggagggagaggcagaggagaacagagggaag
gaggaggcggtggatgatgtggggttgtgctggatggaggcctgctgcagagctctggaa
gtccatgctgccgattccacagtgcaggaagctgcatgttgggccatacacagcctgcta
ttgcatggcagcgagtcatggcaccattccacagaagagcaagacggaaggacaccagtc
cacagacagatcatggctgccatgctgctccactcctcctcccctggggtgttccaggct
gctgccagcgccatgggaacgctcatcacctacaatagtaaaatgcgatctctgttgttg
tccaacggcctccatgtgaacgtggtggagatgatgaagagacatctgtcctctccagag
gtctccgcaggtggatgtaaactgctccacctgctcttcaagggaaggacggccagtctg
gatgaactgaacatggccatgggccagatccttaggaccatgaaggtccataacttcata
cctgaggtccagctggaagctttgagggccagcctggccttcctctgtcctgatagaagt
ttgcgggtgtctgatcacggtgtgtctgtggctgatccagacacagtggacgtgtctctg
agggtgcagaagaaccagagtgtggtggagggggcccacacagtctacctagagacactc
aacaggtttattagcagtgcagccatccaggagtgtggcctgcgtgttctgtctgccctg
gctgactgctctggtgctgtagacctgctctgtcaacagggggcgatagacactgtgctg
cacacactacagatgttccctcgggaacgagaaatacactactggggtctaaacctcctc
tactgccttgtgtctaagaagaagctgtccagaatgatagttcccgtcctggcgtctgtt
ctcgttaccagtctcctgcagtacagagaggacacagagatgctgttaaaggggttccag
gtggccctccgaatgctggacgcctgctcaggggcagcaggggagctgcagagggaaggc
tttgacagagagatcttcctccagctcaaagaaggaccacctgaccggtgcagctacccg
ctctcccagctgcgtaaggctgcatgcctggccctgtccaagatgtgtggcgatgcagag
ctgaagtacagtatgctggagaaggcctgtaaggacggggatgtgctcatggctgagtgt
ctcatccagctaggagccgacatcaacaagaagaccaagaccgagtcgctcatataccag
gtgtgtgagcagggcgggcctctgcagcttgtggtgctgcttctcagccgtggggtccat
gagcagcacctgcgtggggccctgggggccagcgtgcgtcgtggggacggccctgcagtc
atccagctactggggcgtctggggctggacctgaacaacaatgccctctgtctggggggg
ttcaggctgggtcgggtggatgctgcctggctcagccccctgctctctgaacgaggtcgc
gtcagcagtctgcgctccagcacaagtaagggtgcatgtttagctcggtacgtgttatcc
tttcagaggggtaagacgactcctaccccctcgacccccaggtctctagctgacccctgc
cttacctctgggtacatgtcagacgagagtgatgactccagcttcctgtctttagaggac
agtctggtcttcaacgacgatatggagagtgacggtgaggaccatgagacacacagaaca
gcgctccttaaaggcactctctcggtctcacgcatgaaaaagctctggaggaggatgtct
tccctgtaacgcacagcctccgagggagtccagggtgaggttgagctcaacgagccactt
cagaggaggtatggtattcactccccagtcttgagctctgggtataactcctcccctctg
gtcggggacagagagtggatccgcctgctggacctatcagggaatgagctggactctgtg
tcgtgtttgttggacgagggttctgtccgacagcagctggagcacctgtatcgactagac
ttgagccagaacagcctatcagagttcccctctgggctgtgtgagagcttgaagagtctg
acacgtctggatctccaaggcaaccagttgcagtcgttgccagcggagcttctggccctg
ccctcactgagcatgctcaacgtgtcacgtaactgtgtcggcccgcttctgacccttgac
cccgccgtcacctgcccatcgctacggcaactcaacctgtcctacaaccacatcaccacc
ttcccccaccagctgggcagggccatggagcgactggaggagctgtccctcgaggggaac
agaatgggtgagctgtggtctcctctgtgtcttccggagatgaagctcctagacatcagt
aagaacattgtagagagcatctcacatgacttcctgtctggctgccccaaactagagaac
ttcagtgcttgtaccaaccaactcagttcgctgtcacatcttccctcaaagataacaact
ctgaagttgtcacataacagtttcactaccattcctcaagctgttctggatcttccaaat
ttacggtccgtggatatgaggaccaatgacattagagttttaccggggccgtgcgcctgg
gcatcggtcaacctgcgggagctcatgttcggtcagaaccgcatcggagtgctggacctg
agtggacctgaagtttacaagtgggccagactggagaaactacacctgagtgacaataag
ctcacagaggtccctcctcagatcggcctgctggaggagctgacctctctcgacttgagc
cgtaatggcggcctgcgctccttccctgacgagatgggcaagctgagcaggctgtgggac
ttgccactggatggcctgcgcctcagcctggatctcaagcacattggcaacaagaccaaa
gacttagtcaggttcctccagcagcgtctgaagaaagccgttccgtactaccggatgaag
ctgattgtggttggaaacgccgacagtggtaagactgctctgatccgacagctgatgaag
ctcaagcgttctcaatggcagatggagcagcccaccgttgggatcgacgtcagagattgg
accatccgggaccgggataagaagaacatggtgctaaacgtctgggacttctcaggtggg
gaggagttcagtggttctcacccccacttccttaccccccgggccctctacttggtggtg
tacgacctcagtaagggggctgcccaggtggacgcgctcaaaccctggctcttcaacatc
aaggcggtggcccccctgtcaccagtcatcctggtggggacacacacagacgtgagcgag
gacctccagctgcaggcttgcctggataagatccgccaggagctcctcaaccaccagggc
ttccctgccatccgggactatcacatggtggcggtgtgcgaggactcggacaccatcggc
agactccgcaaggccatcgccagggaggtcgccagcttcaagatccaagggcagctggtg
atggggcagctggtcccagaaagctatttggagctggagagaagggtgctgctggagagg
accagggtgccgggggagttccccgtgctcagacaccaatacctgctacagctcatccag
gagagccagatacagctggaggaggctgagctaccccacgctgttcacttcctcagcgag
gccggagtccttctgcactttgacgacccggccctccaactcagagaactctactttatc
gacccacagtggctttgcaacatcatctcacagaaactgtctctgaaaagctctgggttc
tgggagaatcccaaaggcgtagtccagcgctctatggtggagcggttcctatttgagagt
aagtgtttccccaagcgccacctgacccagtactttaaactgctggagaagttccagatc
gccctacctttcggagaggaccagctcctagtgccgagcagtctctccaaacatcggcca
gtaattgagatgccccactgtgaaaattctgaggtcattgttcgtctctatgagatgccc
tacttccccatgggctactggtcgagacagatcaaccgcctacttgaggtctcctcctac
atgctctgtggcagagagagagagctgcgtcccaaccgtatctactggaggagaggcatc
tacctgagctggtctcctgaggcctactgtctggttgaggctgcaaatgtagaggacaac
cctgccagcttcgtcaagatcactgtgccctgctcacgcaaaggtcgtgtgttactgggt
caggtagtggaccatgttgactctctcttggaggagtggttccctggtctcctcaccact
gatatccatggcaacggagagaccctgctgaagaaatgggctctgtacagcttcaaggat
ggacaggagtggagcaagatactgctggaggacctgttcactcacatagataaagactgt
cttttggtaaacccggaggaccctcgctgcacagtgcccatctctcagattgctccagac
ctgatcctcagtgaccagcctgctggaatcatccttgacagcgaggagcttgagatggac
cttaccaaggagaacctgctgggggatggtggttttgggtctgtctatcgaggcatctac
aaaaatgaagaggtggcagtgaagattttcaacaagcatgcctctgatctctatatacac
cgactactccgacaggagttggtggtgttgggtcgtctccaccaccccagcctggtgggg
ctgctggcagccggggcggcccctcatctcctggtgatggagttagcccccagagggtcc
ctggactctctgttcgaacacgagaacagcagcctcaaccgcaagctccagcacaggatt
gctctgcaggtggccgacgggctcaggtatctccactcgtccatgatcatctaccgggac
ctgaagcctcacaacgtgctgctgttcaacctgaaaactgactcagagaccatcgctaag
atcacagactacggcatcgctcagtgctgctgcagcatgggggtcaggagctctgagggc
accccaggtttccgggcgccagaggttgcccggggcaatgtgatctacaaccagcaggcg
gacgtgttctcgttcggcctgctgctatacgacctgctgacttgtggtgagcgcatctca
gatggcatgaagttccccagcgagtttgacgagatcgctgtgcagggcaagctgccagac
ccagtgaagcaccacggctgctccccctggccaggcttccaaggcctcatgaaggactgt
atgagggagaatccccaggacagacccacctccacacaggtgtttgagaggctgaactct
ggggagatgctgtgtctgatgagggagctggtggtcagcagagctgccaatgctgagtgt
ttcacggcgggctgcagcagcgccagcaacggccccagttctaacccaagggcctgggtg
ggagggggcagcagcacacagagactgggctgtgtcgcgtctgtcgacctggagactgag
aaggtcacaacacaggtgattgacacgagtcctgtcttatgcctggtgaccgtccaagtc
ccagacgaagcctgtgattggctggtggctggtacacaatcaggggcactggtcgtcatc
agcactcagaacctgtccaactggcacaacctgcagagtgtcaccgacgctgtgacatca
ctgttcttccacacccaccctcagcgcagtcaaagaaagaattacttgttagttgggaca
gcaaatggaattctgacggtttatgaggactctgcgctccaggtggagaatggccagcca
gtcaagacgttgcacatcgggaacgtcaacaccccagtgatgtgtctgggccaatcaggt
cactccctggacaggaccacggtgtgggccggctgtgggagcagaatcctttccttcacc
gccgactatggcgtctgtaagaccattgacactaaacccaacagcctcttccagcagcat
catgcggtgagcagtgagccgtgtgtgtctcgtatggtagtggagaagcatgtgtacctc
agcaaggctggagggcagagcgtggaggtgtggaataagaagagtgagcggatgattgac
agcattgactgttcccaactactcagacacaactccagccggcgacccagaaaggctaat
tcagagtttgaatttggagcggatagtccaacctgggcgaacatcaagtccctcctggtg
cagcaaaccaccctgtggatcggcacccggggaggccacctcctcctggtagagctggct
aacctccagctgctgcaggtcatcagcccccactgccagtccatacgcagcatggcctct
gtttttatagaaacactaaaccgtaagaatgtggtcctggttttgggaagaagactgtcc
caagataagaatcagtatgacgaggagtctgtactgatggtgtggaacagttctctacct
ctggaggtcaaggacctcaacaaacactgtgagatgagagaggagatcacagccaagatg
agagagcagcaaaacgactga
DBGET
integrated database retrieval system
