Salvelinus namaycush (lake trout): 120065938
Help
Entry
120065938 CDS
T07522
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120065938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120065938
04131 Membrane trafficking [BR:
snh04131
]
120065938
03029 Mitochondrial biogenesis [BR:
snh03029
]
120065938
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120065938
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120065938
mRNA cycle factors
P-body specific factors
120065938
Membrane trafficking [BR:
snh04131
]
Others
Actin-binding proteins
Myosins
120065938
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120065938
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120065938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120065938
NCBI-ProteinID:
XP_038872908
UniProt:
A0A8U1FBK9
LinkDB
All DBs
Position
Sna21:complement(48284771..48355839)
Genome browser
AA seq
1828 aa
AA seq
DB search
MIWNQNVEHKIDPQTNSLPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKMIYT
YCGIVLVAINPYESIPIYDHDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIV
SGESGAGKTVSAKYAMRYFATVSGSSSEANVEERVLASSPIMEAIGNAKTTRNDNSSRFG
KYIEIGFDKNYHIVGANMRTYLLEKSRVVFQATEERNYHIFYQLCASSHLPEFKTLQLGN
ADDFHCTNQGGSPVIEGVDDAKEMCSTRKAFSLLGINETYQMELFQILAALLHLGNVEVE
ERSADSSTILPDNSHLTVFCELMGVAYQDMSHWLCHRKLKTATETYVKPLSKVHAVNARD
ALAKHIYAKLFSWIVDHINETLRSAVKQHSFIGVLDIYGFETFHINSFEQFCINYANEKL
QQQFNMHVFKLEQEEYMKEEIPWTLIDFYDNHPCKDLIEAKMGVLDLLDEECKMPKGSDD
TWAQKLYNTFLKKNDLFDKPRMSNKAFIILHFADKVEYQCEGFLEKNKDTVNEEQIIVLK
LSKFDLLLELFSDEEKPAGSLTSRSKMTRPVQAQRDHKKTVGTQFRNSLHLLMETLNGTT
PHYVRCIKPNDLKSPFMMDPMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFNRYRVLM
KQKDILSDRKQTCRNVLEKWVQDQDKYQFGKSKIFFRAGQVAYLEKLRSDKLKKACVRIQ
KTIRCWLARKRYLRMRQAAITIQKNTRGYQARCLVVFLRRTRAAVIIQKNQRMLVARRRY
QQQRSASITMQRLLRAYQARQTYRKLLYEHKVLTIQRWVRGWLARRRCRRSLRAVVYLQS
CVRRVAARRELRKLRVEARSVEHFKTLNVGMENKIMQLQRKVDEQHKENRELSERLRTVE
RSRAAESERLGREVERLRVAEEESRVKADGVPSLLEQLSFLRQELETTREEKEAIQEQAR
TYRADTEKVVSELNENNSLLITEKDNMNQLIQEQRQQIAESKAKDGMQLESDLREERDHY
QSLLSEYTHLKERHADLKEEMTISVITNKPGHRRTDSNYSSNESEGTPSSGFAEGRNSSV
KTPSSTRSSSGFTESETRSLRGDDASHQDAVDMSVLLKLQRRVTELEQDKQTLQRHLDKR
EEAQQDQVQNAEKQKTAGRAELDLEALKRQELESENKRLKTNLADLRQSLATVSNPGGKT
SPGGKTSPGGKTNPGAKTNPGGKNSTSSPGPGSAPYTVLLEQLNSSNEELEVRKEEVLLL
RSHLVRQEVLKHNKEAYGEMHKMIHLGETPPKEADGSTPDYHKLNEDGELWLAYDGLKET
NSLLVSQLQVQDKRHEEEVEELKEEVLRVREENRQQQQFLSQSLLLPQEARIEASLHHEI
TRLTSDNLDLMEQQEKQDKMIRKLKKQLKVYVKRVEEYEASGQMERVAPGPEPRSPVGIT
RKERDFQGMLEYRRGDESKLLKSLVVELKPRGVAVNFLPGLPAYILFMCLRHADYSNDDQ
RVSILLNSTINSIKGVLKRRGDDFETVSFWLANTCRFLHCLKQYSGEEAFVKNNTPRQNE
HCLCNFDLSEYRQVLSDLAIQNYQQLVRCMEEALQPMIVPGMLEHENFQGVLGSKPTGLR
KRTSSFPGEAVYTVDSILQQLGLVHATLIQHDVDPELIKQGVRQQFYIICSVTLNNLLLR
KDMCSWSKGLQIRYNVWQLEEWLEERGLSDCGAKEMLEPLIQAAQLLQVKKKTEEDAQAI
CTMCSALTTVQIVKVLSLYTPVIEFEERVSISFIRTIQALLKGRVESPLLLMDAKKIFSV
TFPFTHSPLALETIQIPSSLNLGFLTRV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgatctggaaccagaatgtggaacacaagatcgacccccagaccaacagtttacccccg
ctaaggaaccctgatatcctggtgggggagaatgacctgacagctctcagctacctccac
gaaccagcagttctacacaatctgaaagtgcgcttcgtggagtccaagatgatctacacg
tactgtggcatcgtgttggttgctatcaacccctatgagagtattcccatctatgaccat
gacatcatcaacgcctacagtggacagaacatgggagatatggaccctcacatcttcgct
gtggcagaggaggcttacaaacagatggccagagatcagaggaaccagtccatcatagtg
agtggggagtctggggctggtaaaacagtctctgctaagtatgccatgagatacttcgct
acagtcagcgggtcctccagcgaggctaatgtggaggagagagtactggcctctagcccc
atcatggaggccatcgggaatgcaaagacgactagaaacgacaacagcagtcgctttggg
aagtacatcgagattggattcgacaaaaactatcacatcgtcggagccaacatgagaacg
tacttgctggagaaatctagagtggtctttcaggctaccgaggagaggaactaccatatc
ttctaccaactgtgtgcctcctcacaccttcctgagttcaaaactctccagttaggtaac
gctgatgatttccactgtaccaaccagggaggtagccctgtcatagagggagtagacgat
gccaaagagatgtgcagcacccggaaggctttctcactgttaggaatcaatgaaacgtac
cagatggaacttttccaaatcctggccgctctgcttcaccttggcaacgtggaggtggaa
gagagatcggcagacagcagtaccatcctgcctgacaatagtcacctgacggtgttctgt
gagctgatgggcgtggcctaccaggacatgtctcattggctgtgccacaggaaattgaag
actgccacggagacctacgttaagcccctctccaaagtgcatgcggtcaacgcacgggac
gcgctggccaaacacatctacgctaaactcttcagctggatcgtagaccacatcaatgag
actctgcgctctgctgtcaaacagcactccttcattggggttctcgacatctatgggttt
gaaacgtttcacatcaacagctttgagcagttctgtatcaactatgccaacgagaagctt
caacagcagtttaacatgcatgtgttcaagctggagcaggaggagtacatgaaggaggag
attccctggactctgatagacttctatgataaccatccctgtaaagacctcatcgaggcc
aagatgggggtcctggacctgctggatgaggagtgcaaaatgcccaaaggctccgatgac
acatgggctcagaaactttacaacaccttcctgaagaaaaatgatctttttgacaaacct
cgtatgtccaacaaagcctttatcatcctccactttgcagacaaggtggagtaccagtgt
gagggattcctggagaagaataaggacactgtcaatgaggagcagattattgtgctcaag
ctaagcaagtttgatctcctgttggagctgttcagcgacgaggagaagcctgcaggctcc
ctgaccagtcgcagtaagatgacacggcctgttcaggctcagagagaccacaagaagacc
gtcggaacgcagtttcgtaactctctacatctgctgatggagactctcaatggaacaacc
cctcactatgtacgctgcatcaagcccaatgacctcaaatccccattcatgatggacccc
atgagggcagtacagcagttacgggcttgtggagtcctggagaccatccgcatctcagcg
gcaggcttcccatccaggtggacctaccaggagttcttcaaccggtaccgggttctgatg
aaacagaaggacattctctcagacaggaagcagacttgcaggaacgtcctggagaaatgg
gttcaggaccaggacaaataccagtttggaaagagcaagatcttcttcagggcgggtcag
gtggcctatctagagaagctacgttctgataaattgaagaaggcgtgtgttcgtatccag
aagactatcagatgttggctggccaggaagaggtatctccgtatgagacaagcagccatc
accatacagaaaaacacacgaggttaccaggcgcgctgtctggtagtgttcctgaggagg
accagagcagcggttatcatccagaagaaccagcgtatgttagtggccaggagacgctac
cagcagcagaggtctgcatccatcaccatgcagcgtctgctacgggcctaccaggccaga
cagacctaccgcaagctgctgtacgaacacaaggttctcaccatccagaggtgggtgagg
ggctggctggccaggcggaggtgcagacggtccctgagagccgtggtttatctccagagc
tgtgtgagacgcgtggctgccaggagggagctgaggaagctacgggtggaggcgcgctct
gtagaacacttcaagacgctcaacgtgggcatggagaacaagatcatgcaattgcagagg
aaggtggacgaacagcacaaggagaacagagagctcagtgagaggttgcgtactgtggag
cggtcccgggcagcggagagcgagagactggggagagaggtggagcgactgcgcgtggca
gaggaggagagcagagttaaagcagatggggtaccctccctcctggaacagctgtcattc
ctccgtcaggaattggagactaccagggaggaaaaagaggccatacaggagcaggctagg
acatacagggcggacactgagaaggtggtgtcagagttgaatgagaacaacagcttgttg
ataacagagaaagacaatatgaatcagctgatccaggaacagagacaacagatagcagag
agcaaggctaaagacggtatgcagctggagagtgacctccgtgaggagcgtgaccactac
cagagtctgctgagtgaatacacacacctaaaagagagacacgctgacctgaaagaagag
atgactatcagcgtgatcaccaataaaccaggccaccggagaacagactccaactacagc
agcaatgagtctgagggaactcccagctctggattcgcggagggaagaaacagctccgtg
aaaactcccagctcaacacgcagctcctcggggttcaccgagtcggagacgagatctcta
cgaggagacgacgcgtcgcaccaggacgcagttgacatgtcagtcctgttgaagctgcag
aggagagtcaccgagctggagcaggacaaacagacactgcagagacacctggataagcgg
gaggaggcacaacaagaccaggtccaaaatgcagagaagcaaaagactgcggggagagct
gagctagacctggaggctctgaaacgccaggagctggagtcggagaacaagaggctgaag
acaaacctggcggacctgcgtcagtctctagctacagtctccaaccccgggggtaagacc
agccccgggggtaagaccagccccgggggtaagaccaaccccggggctaagaccaacccc
gggggtaagaactccaccagcagccccgggccgggctccgctccctacaccgtgctcctt
gaacagctcaactcctccaacgaggagctggaggtcaggaaggaggaggtgctgctcctc
cgctcacacctggtccgccaggaggtgctcaaacataacaaggaagcgtatggagagatg
cataagatgattcatcttggtgaaactccacccaaagaggctgatggatccactcctgac
tatcacaagttgaacgaggatggagagctgtggctggcttacgacgggttgaaggagacc
aacagcctgttggtgtctcagctgcaggtgcaggacaagaggcacgaggaggaggtggag
gagctgaaagaggaggtgctcagggtaagagaggagaacaggcagcagcaacagttcctc
tcccagagcctcctcctcccccaggaggcccgcatcgaggccagcctgcaccacgagatc
acacggcttaccagcgacaacctggacctgatggagcagcaagagaaacaggacaagatg
atccgcaaactaaaaaaacagctcaaagtctacgtcaagagggtagaagaatacgaagct
agcggtcagatggagagggtggctccaggtccagagcctcgctctcctgttggtatcacc
cggaaggagagggacttccaaggcatgctggagtaccggaggggggatgagagcaaacta
ctgaagagtctggttgtggagctgaagcctcgcggtgtggcggttaacttcctccctggt
ctgccggcctacatcctgtttatgtgtctgagacatgctgactactctaatgatgaccag
agagtcagcatcctgctcaactctaccatcaacagcatcaagggagtcctcaagaggcga
ggagatgactttgagactgtgtctttctggctggccaacacctgccggttcctacactgc
ctgaagcagtacagtggagaggaggcgtttgtaaagaacaacaccccgcggcagaatgag
cactgcttgtgtaactttgacctgtcagagtaccgtcaggtcctcagtgacctggccatc
cagaactaccagcagctggtcagatgcatggaggaggccctgcagcctatgatagttccg
ggtatgctggagcatgagaacttccagggagttctggggtctaaacccacgggcctacgg
aagaggacgtccagtttccccggagaggctgtttacacggtggacagcatcctacagcaa
ctcggtctcgtccacgctaccctgattcagcatgacgtcgaccccgagctcatcaaacag
ggtgtgaggcagcagttctacatcatctgttctgtcactctcaacaacctgctgctgagg
aaggacatgtgctcctggagtaaaggactgcagatcaggtataatgtgtggcagctggag
gagtggctggaggagagggggctgtcagactgtggagctaaagagatgctggagccgctg
atccaggctgctcagttactacaggtcaagaagaagactgaggaggacgcgcaggctatc
tgcaccatgtgctctgctctcaccacagtacagattgtgaaagtgctaagcttgtacacc
ccggtgattgaatttgaggaaagggtttcaatatccttcattagaaccatacaggccctg
ttgaaaggccgcgttgagtcaccgctgctacttatggacgccaagaagatattctctgtg
acatttcccttcacccactccccgctggctctggaaaccattcagatccctagcagtctg
aatctaggattcctcacacgggtctaa
DBGET
integrated database retrieval system
