Salvelinus namaycush (lake trout): 120065978
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Entry
120065978 CDS
T07522
Name
(RefSeq) reelin-like
KO
K06249
reelin [EC:3.4.21.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120065978
04518 Integrin signaling
120065978
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120065978
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Ortholog
Paralog
GFIT
Motif
Pfam:
Reelin_subrepeat-B
EGF_Teneurin
EGF_2
EGF_TEN
EGF_PEAR1L
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
120065978
NCBI-ProteinID:
XP_038872946
UniProt:
A0A8U1FB54
LinkDB
All DBs
Position
21:complement(54546872..54611373)
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AA seq
2370 aa
AA seq
DB search
MTGRHGGTNQLRDSFQEEDCNWILCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWTLCG
RLRDSFQEEDCKWTLCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWILCGRLRDSFQEE
DCNWILCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWTLCGRLRDSFQEEDCKWILCGR
LRDSFQEEDCKWILCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWILCGRLRDSFQEED
CKWILCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWILCGRLRDSFQEEDCKWILCGRL
RDSFQEEDCKWTLCGRLRDSFQEEDCNWILCGRLRDSFQEEDCKWTLCGRLRDSFQEEDC
NWILYKRVAPLWQSLSGGQIGGGCGTISEGKALYFSSSGKRQALTVTLDTTNTRLVQFYI
RIGGKNVGPTCTRPRSRNEGVVVQFSTNNGVQWQFLRELDFGSFLEPQVVTIELPPAAKT
PYTVFRWWQPQQGKHSAQWAMDDVLIGMNDSSRTGFHDKFAGTSPLRHNWYRVQGGEVTV
DCLSLDTALSFYSDATDKKPRYAESWDFEVSGSSFLQFDLSMGCSKTVTSSHGVRLEYST
DCGRHWALLTSECVPPAIGCAGYTMNSVYTATQYTRWRRITVYLPSAANSPRTRFRWIQP
HFIPGADGWALDNVLLAPGCPWMCSGHGLCDNGRCVCDHGYGGAHCVPLAPLPSILREDF
NENLVAEQWPEVYGAERGTLSGEPLKSGTALIFKGEGLRMLVSRDLDCTSTLYIQFSFKF
ITKGVPERSHSVLLQYSVNGGISWLLLDEFYFPTSTDTLFLHLPLPARAQTNATRFRLWQ
PYNSGKKEEVWVIDDLIIDGSSLNNPPVVSDNFEGGPQNSNWLFYPGGNTGLYCPYQKRG
LEKDESAMVFLSSELGEHSITTRDIDVNENTIIQFEINVGCTADSSASNPVRLEFSRDFG
STWHLLVPLCSGGPQPSSLCSTELHPASVYYPGTTQGWRREVIHFGKLRLCGSIRFRWYQ
GFYSSSSSPPTWALDSVYIGPQCQDMCNGHGTCVKGTHCVCDPGYSGADCSQPDTLNPDF
LKEDFEGGAMDAELFSLLSGGKPSRKCGIMSSGNHLFFSEDGLRMLVTNDMDLSNARFVQ
FFLRLGCGKASPDPRSQPVLLQFSVDGGLTWGLLQDFLFSNSSNQARLVALEIPLRARTS
STRLRWWQPSENGHFYSPWVIDQLVVGGSASGWGPLEDDFSSMDGRSWLLHPGGTRMPVC
GSDGAAFAFIEKSNTRYAVTTDISLGQDAFIQFDFSASCSVTNSCYAIELEYSLDLGLSW
QPLVRDCLPTSPDCSSYTLQRLLVADTYNKWGRVTLPIPTYARSPATRFRWFQQAPFDKQ
QTWALDNLYIGDGCPDMCSGHGRCQQSNCVCDPEWGGEYCDEPVAPLPSQLKDSFSRAPS
LSHWHLVTGAKLSTVCGAVASGAALHFSGSCSRQLVTVDLNLTNAEFIQFYFMYGCMTPP
SNRNQGVLLEFSLNGGINWNLLTEIFYDLYSKPGFVNVLLPPAARQEGVRVRWWQPTHEG
ADHSDWALDNLLIAGSDPRAQITDTFGGVALPNHERAPADGTPTGRIGLLSEGEEESTSV
SDHWLFSEDCVVQRFCSSPDGVMVCGSDDGREVYAVTHDIIPDKDWVMQFKIAVGCGVPE
RQAERQVHVQYSVDFGVSWRYLVFQCLPADPRCGGHVSQPSVFFPAQGWKRAVYPLPDSL
ADTAVRFRFYQQHSDTQWAVENFYIGPACDGHCGGHGDCLDQRCLCDPGFTGPNCYASTS
LKASLKERFDWEGAPGPQWQVLEGGHPCTDCGVLVEGTALYFGGADARQAVSTDLDLRGA
KFVEYWARIGSEDNMTMCHRPTCRKEGVLLDYSTDGGVSWTLLHEMDYLKYVSVRRDYIV
LPEGALSNATRLRWWQPFHVSSGLATSGPERAQWAVDNILVGGSDINPSSLLDNFDDEGV
SHEESWSFYPNAVRTAGFCGNPSFHLYWPNKKQDKTHNILATRELIVQPGYILQFKIVVG
CEADSCEDHHSVLLQYRKDARSDSWQLVQSECIPSSVNNVGCSPFMFHESTIYSPVNSSS
WTRVTVQLPDHVSSGATQFRWIQKEGAGERHGWGVDNVYIGEACPGICSGHGYCTSGVVC
ICDEGHHGDDCSLSSSDLPSSIKDNFESGSVSEESWQLIQGGGVGSGCGQLSPHAHGDSL
YFNGCKTRQAITKPLDLTRASKIMFVLQIGSVSQTDSCNTALDQADTVDRAVLLQYTVNN
GVSWHVIAQHQPKDFIKAQRVSYNIPLEARVKGVELRWWQPRHDGAGHDQWALDHVEVVL
TRKQNYMMNFARQTGLRHYYSRKRRALQHA
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcggcatggaggaaccaatcaactgagggacagcttccaggaggaggactgt
aactggatcctgtgtgggagactgagggacagcttccaggaggaggactgtaaatggatc
ctgtgtgggagactgagggacagcttccaggaggaggactgtaaatggaccctgtgtggg
agactgagggacagcttccaggaggaggactgtaaatggaccctgtgtgggagactgagg
gacagcttccaggaggaggactgtaaatggatcctgtgtgggagactgagggacagcttc
caggaggaagactgtaaatggatcctgtgtgggagactgagggacagcttccaggaggag
gactgtaactggatcctgtgtgggagactgagggacagcttccaggaggaagactgtaaa
tggatcctgtgtgggagactgagggacagcttccaggaggaggactgtaaatggaccctg
tgtgggagactgagggacagcttccaggaggaagactgtaaatggatcctgtgtgggaga
ctgagggacagcttccaggaggaggactgtaaatggatcctgtgtgggagactgagggac
agcttccaggaggaagactgtaaatggatcctgtgtgggagactgagggacagcttccag
gaggaagactgtaaatggatcctgtgtgggagactgagggacagcttccaggaggaggac
tgtaaatggatcctgtgtgggagactgagggacagcttccaggaggaagactgtaaatgg
atcctgtgtgggagactgagggacagcttccaggaggaggactgtaaatggatcctgtgt
gggagactgagggacagcttccaggaggaggactgtaaatggatcctgtgtgggagactg
agggacagcttccaggaggaggactgtaaatggaccctgtgtgggagactgagggacagc
ttccaggaggaggactgtaactggatcctgtgtgggagactgagggacagcttccaggag
gaagactgtaaatggaccctgtgtgggagactgagggacagcttccaggaggaggactgt
aactggatcctgtacaagcgtgtggctccgctgtggcagagcctgagtgggggtcagatt
ggaggcggctgcggtaccatcagcgagggcaaagcgctgtacttcagcagctctgggaaa
agacaggcactgacggtcaccctggatactaccaacacacggctggtccagttctacatc
cgaatcggagggaagaacgttggacccacctgtactagacctcgctcccgcaacgaagga
gtggtagtccagttctcaaccaacaacggagtgcagtggcagttcctgagagagctggac
tttggctccttcctggaaccccaagtggtgaccattgaactgcctccagccgccaagacc
ccctacacggtgttccgctggtggcagccccagcaagggaaacactcagcccagtgggct
atggatgatgttctgatcggtatgaacgacagctccaggactggtttccatgacaagttt
gccgggacgtctcctctgagacacaactggtaccgtgtccaggggggagaggtcacagtg
gactgtttgtctctggacacagctctgtccttctactccgatgccacagacaagaagcca
cgatatgcagagagctgggactttgaggtgtctggctcctccttcctgcagtttgacctg
tctatgggctgcagtaagacagtcacgtcctctcatggtgtcaggctggagtattccaca
gactgcgggcgtcactgggccctgctcacctcagagtgtgtaccacctgccatcggttgt
gccggctacactatgaactctgtctacaccgctacacagtacacccgttggaggaggatt
acggtgtatctacccagcgctgccaattctcccaggacacggttcaggtggattcagcct
cacttcatccccggagctgatggctgggccttggacaacgtgctgctggcccctggttgt
ccctggatgtgctctggacacggactctgtgacaacggacgctgtgtgtgtgaccatggt
tatggcggggcccactgcgtgcccctggcccccctcccctccatcttgagagaagacttc
aacgagaacctggtggcggagcagtggcccgaggtgtacggggctgagagggggacgctc
agcggggagcccctcaaatctggcaccgcactcatcttcaaaggggagggtctacgtatg
ttggtgtctagggatctagactgtaccagcactctctacatccagttctccttcaagttc
atcactaagggtgtcccagaacggtcccactcggtgctgctgcagtactcagtgaacgga
ggaatcagctggttgctgttagatgagttctacttccccacctctactgacacgctgttc
ctacacctccctctgcctgccagggcccagaccaacgctacccgcttcaggctctggcaa
ccctacaacagtggtaagaaagaggaggtgtgggtgattgatgacctgatcatcgatggc
agctcgctcaacaaccctcctgtagtctcagacaacttcgagggcggaccccaaaactcc
aactggctcttttacccaggaggcaacactggactctactgcccctaccagaagaggggc
ctggaaaaggatgagtctgccatggtgtttttatccagtgagctgggagaacattctata
accaccagagacatcgacgtcaacgagaacaccatcatccagtttgagatcaacgtgggt
tgcacggcagacagctcagcctctaacccggtacgactggaattctccagggactttggg
tccacctggcacctcctggtgcccttgtgttcaggaggcccccagccctcttccctgtgc
tccacagagctgcacccagccagtgtctactacccaggaaccacccagggctggaggcgg
gaggtcatccactttggcaagctgagactctgcggctccatccggttccgttggtaccag
ggcttctactccagcagctcctcccctcctacctgggccctggacagtgtgtacattggc
ccccagtgccaggacatgtgtaacggacacgggacgtgtgtgaaggggacacactgcgtc
tgtgacccaggctactcgggcgcagactgctcccaacccgacacactcaaccctgatttc
ctcaaggaagactttgaaggaggggcgatggatgcagagctgttcagccttctgagtgga
gggaagcctagcaggaagtgtggcatcatgtccagtgggaaccacctgttcttcagcgag
gatggcctgcgcatgctggtcacgaacgacatggacctttccaatgccaggtttgttcag
ttcttcctgcgtctgggctgtgggaaggcatccccagacccccgttcccagcccgtcctg
ctccagttctctgtagacggaggtctgacctggggcctgctgcaggacttcctcttctca
aacagcagtaaccaggctcgcctggtggccctagagatccctctgcgtgcccgtacctcc
tccacacgtctccgctggtggcagccctctgagaacggacacttctatagtccatgggtc
attgaccagctggtggtgggtggcagtgccagtggctggggacctctggaggacgacttc
tcctctatggacggtcgttcctggctgctccaccccgggggtacccgtatgcccgtgtgt
ggttctgacggggcggccttcgccttcatagagaagtccaacacgcgctatgctgtcacc
acagacatcagcctgggtcaggatgccttcatacagtttgacttctcagcttcctgctct
gtcaccaactcctgctacgccattgaactagagtattctctggacctgggtctgagctgg
cagcctctggtgagagactgtctccccaccagcccagactgctcctcctacaccttacag
agactgctggtagccgacacctacaacaagtggggccgagtcactctgccaatccccacc
tatgccaggtctccagccacgcggttccggtggttccagcaggctccgtttgacaagcag
cagacctgggctctggacaacctctacatcggagacggctgccctgacatgtgctccgga
cacggacgctgccagcagagcaactgtgtgtgtgatccagagtggggaggagagtactgt
gatgagcctgtggcccctctgccctcccagctaaaggacagcttcagtcgagccccctct
ctcagccactggcacctggtgaccggcgcaaaactcagtactgtgtgtggggccgtggca
tctggtgctgcactgcacttcagtgggagttgtagtcgtcagctggtgacggtggacctg
aacctgaccaacgcggagttcatccagttttacttcatgtacggctgcatgaccccacct
agcaaccgtaaccagggcgtgctgctggagttcagtctgaacggaggcatcaactggaat
cttctgacagagatcttctatgacctgtacagcaagcctggatttgtcaacgtgctgcta
cccccagcagcccgtcaggaaggggtgcgtgtgcgctggtggcagccgacacacgaagga
gcggaccacagcgactgggcgctggacaaccttctgatagccggctctgacccgcgggct
cagataactgacacatttggaggggtggcgctgcccaaccacgagagagctcccgctgat
ggtacacccacaggcaggataggactccttagtgagggagaggaggagagcacctcagtg
agtgaccattggctgttcagtgaggactgtgtggtacagagattctgtagttctccagac
ggtgtgatggtgtgtggtagtgacgacgggagagaggtctacgctgtcacacatgacatc
atacctgacaaagactgggtcatgcagttcaagatagcagtgggctgcggtgttccagag
cgccaggcggagcggcaggtccacgtccagtactctgtggacttcggtgtgtcctggagg
tacctggtgtttcagtgtctccctgcggaccctcgctgtggaggacatgtctcccagccc
agcgtcttcttccctgcccagggctggaaaagggccgtctaccccctaccggacagcctg
gcagacaccgcggtccgtttccggttttaccagcagcactcggacacccagtgggctgtg
gagaacttctacatcgggccggcctgtgacggccactgtgggggacatggagactgtcta
gaccagagatgtctctgtgaccctggcttcactggacccaactgctacgccagcacttct
ctcaaggcgtctctgaaggagcgttttgactgggagggggccccaggccctcagtggcag
gtcctggaggggggccatccctgtaccgactgtggggtgctggtggaggggacagccctg
tactttggaggggcagatgccagacaggccgtctctactgacctggacctccgcggagcc
aagtttgtagaatactgggccaggatcggcagtgaagacaacatgaccatgtgccatcgc
ccaacctgtcgtaaagagggagtgctgctggactactccacagatggaggtgtgtcctgg
accctgctccatgagatggactatctgaagtatgtgtctgtgaggcgtgattacatcgtg
ctaccagagggggcgttatctaatgctacacggttgcggtggtggcagcccttccacgtc
tcctctggtctggcgacatccgggccggagcgcgctcagtgggccgtcgacaacatcctg
gtgggagggtctgacatcaacccttccagcctgctcgacaacttcgatgacgagggtgtg
tcacatgaggagagctggagcttctatcccaatgcggtgcgtacagcaggcttctgtggg
aacccctctttccacctctactggcccaacaagaaacaggacaaaacacacaacattctg
gccacccgcgagctcatcgtacagcctgggtacatcctacagtttaagattgtggttggt
tgtgaggcagacagctgtgaagaccaccattctgtcctgctgcagtacaggaaggatgcc
aggtctgactcatggcagctggttcagtcagagtgtattccctcctctgtgaacaacgtg
ggctgttctcccttcatgttccatgagtccaccatctacagtccagtcaacagctccagc
tggaccagggtcactgttcagctgcctgaccacgtctcctcaggagccacgcagttccgt
tggatccagaaggagggtgctggcgagcgtcatggctggggggtggacaatgtctacatc
ggggaggcatgtcctgggatatgtagcggtcatggttactgtaccagcggggtggtctgc
atctgtgacgagggacaccatggtgatgactgctccctgtccagcagtgacctacctagc
tcaataaaggataactttgagtcaggcagcgtgtcagaggagagctggcaactcatccaa
gggggcggggtgggtagtgggtgtggccagctctctccccacgcccacggagactcgctc
tactttaacggctgtaagacgaggcaggcgatcaccaagcctctggacctgacacgagcc
agtaagatcatgttcgtgctgcagataggcagtgtgtcccagacagacagttgtaacaca
gccctggaccaggctgacacagtggacagggcagttctgctgcagtacacggtcaataac
ggagtcagctggcacgttatcgcccaacaccagcccaaagacttcatcaaggcccagagg
gtttcctacaacatcccactagaggcgagggttaaaggggtggagctgcggtggtggcag
ccacgtcacgacggagcgggacatgaccagtgggcgctggaccacgtggaagtagtgctc
acccgtaaacaaaactacatgatgaactttgccagacagaccggcctacgtcactactac
agccgaaagaggcgggcactgcagcatgcctaa
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