Salvelinus namaycush (lake trout): 120066018
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Entry
120066018 CDS
T07522
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) TBC1 domain family member 10B
KO
K20133
USP6 N-terminal-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120066018 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120066018 (si:dkeyp-19e1.3)
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Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120066018
NCBI-ProteinID:
XP_038872991
UniProt:
A0A8U1FB86
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All DBs
Position
21:complement(4446530..4539131)
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AA seq
905 aa
AA seq
DB search
MKKDIETLIAEERADIISKYDKGRQEGVHIDPWEDTDYSIYKVTDRHGFLHEEELPTPSA
IEEKQKHQEIERVEKWLKMVKKWDKYRNSDKMVKRVYKGIPLQLRGQAWALLLDVEKVKQ
ENSGKYETMKEQARSFSTEIKQIDLDVNRTFRNNIMFMERFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALSQLLTNNNHAMHGFFIPGFPKLQRYQAHHEQI
LSKLLPKLKKHLDREQMSNGIYTTKWFLQCFIERTPFTLTMRLWDIYILEGERILTAMAY
TTLKIHKKRLQKLPLEDLREFLQEHLSSSFFLPDDVVVEQLQAAMAELRKMKLDLPPSAK
SEELPKKPLGEERPVLLMPFQRDLALPLDQPKTSLQPPLQLQPHIEAHRPDTITLDCSSC
PGDTSSIPGAHDPPRPMPSQDPVVVHNQALMPEVPLSCPVTPPKPPPKPHKVGSTPGVRG
VRDRVEECPSDHVSEVEKAGERSLSEGRGGRAGMEARSAGPETQGETGYWPPPYEPPVGD
VSITQSGSGSKTLEFPDLPPPHFYSMEESAHTPLDPEPPCLRDGTKVGLKSDSVPPCSAL
SLGVEPLPKPKSPRPPPPTSLDLILEESPSSRPSFSLAFAKPSPGITFKPTKFPMSLCVP
QTAGDRRPSNTSQYDNLSEADDEDCFMDRLLEGATALPQSPLPGTSPQETLGMFGLPPPP
CIPELCDDPSSSSLFHPLPPPPPVFLLYLPDTSPTPLSASPSPLPPTFSALPSLPQEPDY
EGQEDSWMVDSIVIPPPPPCFADRLAPFQYSPPNHHTGLSSLTDTHRATTANQSQSSNQN
QGSSQFQKLPKAHRPLPALPAFTAQMLLPGPSSGQSAGEVPSVRSNPDFYRMHAGSHQLP
KSVTF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacattgagacgctgatagcagaggaacgggctgacataatctccaagtat
gacaagggcaggcaggagggtgtccacatcgacccctgggaggatactgactacagcatc
tataaggtcacagaccgccacggcttcctgcacgaagaggagctgccgactccgagtgca
attgaagagaagcaaaagcatcaggagatagagcgggtggagaaatggctgaagatggtc
aagaagtgggacaagtacaggaacagcgacaagatggtgaagcgtgtgtacaagggaatc
cccctccagttgagaggccaggcctgggctctgctactggatgtagagaaggtgaagcag
gagaactctggaaagtatgagactatgaaggagcaggccaggagtttctctacagagatc
aaacagattgatctggatgtcaacagaaccttccggaacaacatcatgttcatggaacgc
tttggagtcaagcagcaggccctgttccatgtgctagcggcctactccgtatacaacacg
gaggtgagctactgccaggggatgagtcagatcgccgccatccttctcatgtacctgaac
gaggaggacgccttctgggccctgtcccagctcctcacaaacaacaaccacgccatgcat
ggattcttcatccctgggttccccaagctgcagcgctaccaggcccaccacgagcagatc
ctgtccaagctcctccctaagctaaagaaacacctggacagagagcagatgtccaacgga
atatacaccactaaatggttcctgcagtgcttcatagaaaggaccccgttcaccctgacc
atgcgcttgtgggacatctacatcctagagggagagaggatactcacagccatggcctac
accaccctcaaaatacacaagaagcgattgcagaagcttcctctggaggacctgagggag
ttcctccaggagcacctgtccagctcattcttcctacccgacgacgtggtggtggagcag
ctgcaggcggccatggccgagctccgcaagatgaagctggacctcccaccatcagccaag
tcagaggagctgcctaagaagcccctcggtgaggagcggcctgttctcctgatgcccttc
cagcgtgatctagccctccctctggaccagcccaagaccagtctccagcccccgctccag
ctccagccccacatagaggcccacaggccggacaccatcacccttgactgctcttcctgt
cccggggacaccagtagcatccctggggcccacgaccccccgcgccccatgccctctcaa
gacccagtggtagtccacaatcaggctctgatgccagaagtgcctttaagttgtccagtc
accccaccaaagcctccgccgaagccacataaggttgggtccactccaggggtgcggggt
gtcagggatagggtggaggagtgtccgagtgaccatgtctcagaggtggagaaagcagga
gaaaggagtctgtctgagggtaggggtggtagagcggggatggaggcccgatctgcaggt
ccagagacccagggagagaccggttactggcctccgccctacgagccccctgttggggat
gtttccatcacgcagtctggatcagggtccaagacactggagttcccggatctaccccct
ccacacttttactctatggaagagagcgcccacacacccctggaccccgaacctccatgc
ttgcgagacgggaccaaggtagggctgaagtcggactctgtgcccccctgctcggctctt
tcactaggggtagaacccctaccgaagcctaagagtccgcgtccacctccacccacgtcc
ctggacctcatcctggaggaatccccgtcctcgcggccctctttttccctcgcctttgcc
aagccgtcccccggaatcaccttcaagcccactaagttccccatgtcgctctgcgtgccc
cagacagcaggggaccgccggccctcaaacacctcccagtacgacaacctctcggaggct
gacgacgaggactgcttcatggaccggctgctggagggtgccacggccctgccgcagagc
cccttgccaggcaccagccctcaggaaacactggggatgttcggcctaccaccaccgccg
tgcatacccgagctgtgtgatgacccctcatcttcctctcttttccatcccctaccaccg
cctcctccggtgttcctcctttacctgcccgacacctctcccacccctctctctgcctcc
ccctctcctcttcctcccaccttctcagcccttccttctcttccgcaggagccggactat
gaaggacaggaggatagctggatggtagattctatcgtcatccctcctccgccgccctgc
ttcgccgatagactggctcctttccagtatagccctcctaaccaccacactgggctcagc
agcctaacggacacacacagagccaccactgccaaccagagtcaaagctcaaaccagaac
cagggctcctcccagttccaaaaactgcccaaggcccacaggcccctccctgctctgcct
gccttcacggcccagatgctgcttccggggccctcatctggacagtcggcaggagaggtc
ccctcagtgcgatccaacccagacttttatagaatgcatgctggaagccaccagctgccc
aaatcggtaaccttttag
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