Salvelinus namaycush (lake trout): 120066053
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Entry
120066053 CDS
T07522
Symbol
snx33
Name
(RefSeq) sorting nexin-33
KO
K17923
sorting nexin-9/18/33
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120066053 (snx33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120066053 (snx33)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120066053 (snx33)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120066053 (snx33)
Macropinocytosis
Sorting nexins
120066053 (snx33)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120066053 (snx33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
BAR_3
Motif
Other DBs
NCBI-GeneID:
120066053
NCBI-ProteinID:
XP_038873062
UniProt:
A0A8U1H8W9
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All DBs
Position
Sna21:complement(8983542..9021526)
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AA seq
558 aa
AA seq
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MSMKGKALYTFQSENKEEISIQENEELVIFDDNSVDGWLQGENSKGQKGLFPASYVEVIR
PRSNSNLTDCSISPVGSPGNDSSYFPSAPNTPFHMQQGYYDDDDDDWDDWDDSSTVVDDD
GRSGANGHSHQSPHSNNPNVHYRAKPYMERQDSISSSRKGSMVGRNLNRFSSFVRSGVEA
FVLGDVPMNAKIAESYTIEMGPKGPQWKDSPTPFSCSIEDPTKQTKFKGIKTYISYRVTP
SHNARPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMDH
MTSHPVLSQYEGFEHFLMCADDKQWKLGKRRAEKDEMMGANFMLTFQIPNEHQDLQDVEE
RVDSFKSFAKKMDDSVMQLTHVASELVRKHLGGFRKEFQRLGNAFQNVSQAFMLDPPHCS
DALNTAISHTGRTYENIGEMFAEQPKYDLFHMLDKLSLYQGLLANFPDIIHLQKGAFAKV
KESQRMSDEGKMDQDEADGVRKRCRTVGFALQAEMNHFHQRREVDFKEMMQAYIKQQIAF
YQRVGQQLERTLHMYDNL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaaggcaaggcactctacactttccaaagtgaaaacaaagaggagatcagc
atacaggagaatgaggaactggttatctttgacgataactctgtagatggctggttacaa
ggggagaacagtaaaggacagaaaggtctcttcccggcctcttacgtggaagtaatccgc
cctcgttccaactccaacctgacagactgctccataagcccggtgggttctccaggcaat
gactcctcatatttcccctccgccccaaacacgccctttcacatgcaacaaggttactat
gacgacgatgatgatgactgggatgattgggatgacagttccacagtggtggacgatgat
ggccgcagtggcgcaaatggacattcccatcagagcccccactccaacaaccccaatgtc
cactatcgagccaaaccttacatggagaggcaggacagcatctccagctcgcggaagggc
agtatggtgggaaggaacttgaaccgattctccagctttgtacgctcaggggtggaagct
tttgtgttgggcgatgtgcccatgaacgctaagatagcggagtcgtacaccattgagatg
ggccccaaagggcctcaatggaaagacagccccacacctttctcttgctccatcgaggac
cctaccaagcagaccaagttcaaaggcatcaagacctacatatcgtaccgagtgacccca
agccacaatgcgaggcctgtgtaccggcgttacaagcacttcgactggttgtacaaccgt
ctactgcacaagttcaccgtcatctccgtgccccacctgcccgagaaacaggcaacaggg
cgcttcgaagaggacttcatcgagaagcgcaagaggcggctgatcctctggatggaccac
atgaccagccacccggtcctgtcgcaatacgagggtttcgagcacttcctcatgtgcgcc
gacgacaagcagtggaagctgggcaaacggcgggcagagaaggacgagatgatgggcgcc
aacttcatgcttaccttccagatcccaaatgagcaccaggacctgcaggacgtggaggaa
cgtgtggactccttcaagtctttcgccaagaaaatggatgacagcgtcatgcagcttacg
catgtggcctcagaactggtgcggaagcacctcggaggcttccggaaggaatttcagcgg
ctggggaacgccttccagaacgtcagtcaggcgttcatgctggaccctccccactgctcg
gacgccctcaacaccgccatctcccacacgggacgtacttacgagaacattggggaaatg
tttgcggagcaacctaagtatgacctcttccacatgctggacaaactgtcactctaccag
ggcctactcgccaacttcccggacattattcatctacagaaaggtgcgttcgccaaggtc
aaagagagtcagcggatgagcgacgaagggaaaatggaccaggacgaggcagacggagtg
cgtaaacgctgccggacagtgggattcgctctacaggctgagatgaaccacttccaccag
cgccgcgaggtggacttcaaggagatgatgcaggcctacatcaaacagcagatcgccttc
taccagcgcgtgggccaacagctggagcgtaccctgcacatgtacgacaacctgtag
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