Salvelinus namaycush (lake trout): 120066141
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Entry
120066141 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120066141
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120066141
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120066141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
WDR55
zf-RING_5
Beta-prop_EML_2
zf-C3HC4_3
EIF3I
zf-C3HC4_2
zf-rbx1
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR3_2nd
zf-RING_Vps41
zf-RING_11
Beta-prop_WDR75_1st
zf-C3HC4_4
zf-ANAPC11
WD40_Prp19
Rtf2
WD40_WDHD1_1st
CFAP43_N
Beta-prop_EML
WD40_2
Beta-prop_RIG_2nd
Zn_ribbon_TiaS
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
zf-UDP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120066141
NCBI-ProteinID:
XP_038873210
UniProt:
A0A8U1H9I4
LinkDB
All DBs
Position
21:complement(17385632..17404025)
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AA seq
715 aa
AA seq
DB search
MEVMEAMEVDLQLGGPSREPEPDVVADQVDLPIVIPDSGSETEDEADAAPCDPPRLPNTW
AFSQNRARVEGQVGSRIRREGHIEPRVTTAATLRQRRSRPGLREHYSTQTAARASSFLDF
LLRVPAANQAEGDSGSTTELSESEDEADPLGPAADPPNSAVPSSPRPNPPVTPPEGLYSS
DSNATTEAARTVTGNQVNPEVVSDPLASSAPALRLSQGDEGEGETCSICFEPWTTSGEHQ
LATLRCGHLFGYTCIDRWVKGQGQGAKCPQCNKKAKRTDIVLLYARNLRALDNTEQESMK
RSLEQEHSLRRKADLESAQCRLQLQVMTDECGKLHKQLQELKTLMAQPGCGPSQSSGASL
SGPFQRQDSTQGGHYVFSKAVLVSQVGGCRVLSYCEPLSCLLASQPSPHTTLVPGCGVKK
VSTVNLKACQYIPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNTGKP
VWSCCWCLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRAASSS
FPCGGLIAGSLDGGCFWEQVDGTTYRPHMLPLETGGCTDIQVQPESRHCLVTYRPGRSKP
SLRCVLMELNRTPQQDAAQEPSCSCYPVQTFSAGSSCKLLTKNAVFRSPAGEGSTLVCAG
DEATNSTMVWDAGSGTLIQKLSADLPVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatggaggcgatggaggtggacttgcagctggggggccccagtagggaacca
gagccagatgttgtggcagaccaggtagatctccctattgtcatccctgactctggcagt
gaaacagaggacgaggcagacgcagctccctgtgacccaccacggctcccgaacacctgg
gcgttcagtcagaacagagccagagtggagggtcaagttggatccaggatcagaagggag
ggtcatattgagcccagggtcaccacagcagccaccctgaggcagcggagatccaggcca
ggcctcagggagcactactccacccagaccgctgctcgtgctagcagcttcctggatttc
ctgctgcgagtccctgcagccaaccaggccgagggcgactctggaagtacgacagagctg
agcgagtcggaggatgaggcagatcccctggggccagcagcagaccctcccaattcggcc
gttccctccagccctcgtccaaaccctccagttacgccacccgaaggcctttattcttca
gattctaatgcaaccacagaggctgcgaggactgtgactggaaatcaagtgaatcctgag
gttgtatcagacccactagcctccagtgcaccggcccttcgattgtcccagggggatgag
ggggaaggggagacctgctccatctgctttgagccctggaccacgtcaggggagcatcag
ctggccaccctgcgctgcggacatctctttggctacacctgcatcgaccgctgggtgaag
ggccagggccagggagccaagtgtccccagtgcaacaagaaggccaagcgcaccgatatc
gtcctcctgtacgcgcgcaacctgagggctctggacaacaccgagcaggagagtatgaag
aggtcactggagcaagagcattcactgcgtagaaaggctgatctggagtcagcgcagtgc
cgactacaactgcaggtgatgacagacgaatgtgggaaattgcataagcagctacaggag
ctgaagacgctgatggcccagcctggctgtgggccctcacagagctcaggggcttctctc
tctgggccctttcagagacaggacagtacccaggggggccactatgtcttctccaaggcc
gtgctggtgtcccaggtggggggatgcagggtgctgtcctactgtgaacccctcagctgc
ctgctggcctctcagccctccccacacactaccctggtgcccggctgcggtgtgaagaag
gtgagcacggtgaatctgaaggcctgccagtacattcccatccatgttaaacagatcaga
ggcctagccttcaacagacaggccgacagtctcctgctctccgctgccctggacaacacc
ataaaactcaccagtctaatgaccaacacagtggtgcagacctacaacacaggtaaacca
gtgtggagctgctgctggtgcctggacaacaacaactatgtgtacgctggtctcagtaac
ggctccgtgctggtgtatgacaccagggacaccagcacacatgtccaggagctacagccg
ctacgttccaggtgtcccgtggcatccctgtcctatgtgcctcgcgccgcctccagctcg
ttcccatgtggtggcctcatcgcaggctctctggatgggggctgcttctgggagcaagta
gacgggaccacctacagaccccacatgttgcccctggagacaggaggctgcacagacatc
caggtgcagccagagagcagacactgtttggtcacctacagaccagggcgctccaagcca
tcgctgcgctgtgttctgatggagctgaacaggactccccagcaggacgcggctcaggaa
ccctcgtgttcctgctacccagtccagacattcagtgctggctcctcctgcaagctgctc
accaagaatgccgtgttcagaagcccggccggggagggctccactctggtgtgtgccggg
gacgaggccaccaactccaccatggtgtgggatgcagggagtggaaccctgattcagaag
ttgtctgctgacctcccagtgttggacatctgcccgtttgaggtgaaccagggcagttac
ctggcctctctcactgagaagatgctcaaaatttacaagtgggaatga
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