Salvelinus namaycush (lake trout): 120066144
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Entry
120066144 CDS
T07522
Name
(RefSeq) nuclear transcription factor Y subunit beta isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066144
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120066144
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Ortholog
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
CENP-T_C
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
120066144
NCBI-ProteinID:
XP_038873218
UniProt:
A0A8U1FCL4
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All DBs
Position
21:complement(17526851..17564364)
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AA seq
205 aa
AA seq
DB search
MDGDSSTTDASQLGMSGEYMAGSHYVLQSQDDDGDESLHDHEEGNGSKENFREQDIYLPI
ANVARIMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFA
MSTLGFDMYVEPLKLYLQKFREAMKGEKGIGGVSVTEGLGEELTDDSFANQLPAGIITAD
GQQQNVMVYTTSYQQIPGVQQIQFS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacagttcaaccaccgacgcctctcagttgggaatgtcaggggagtacatg
gcaggaagccactacgttcttcagtcacaggacgatgatggggatgagagcctgcatgac
catgaggaaggcaacggcagcaaggaaaacttccgtgagcaggacatctacctccccatc
gctaacgtggctcgcatcatgaagaacgccgtcccacagacaggaaagatagcaaaagat
gccaaggagtgtgtgcaggagtgtgtgagcgaattcatcagcttcatcacgtcggaggcc
agcgagcgctgccaccaggagaagaggaagacaatcaacggcgaggacatcctgtttgcc
atgtccaccctgggcttcgacatgtacgtggagcccctgaaactctaccttcagaagttc
agagaggcgatgaaaggggagaagggaatcggaggcgtatctgtaacggagggactcgga
gaagaactcacggacgacagcttcgcgaaccagttgcctgctggaataataactgctgat
ggacaacaacagaatgtcatggtttacaccacctcgtaccaacagatccctggagtgcag
cagatccagttctcttga
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