Salvelinus namaycush (lake trout): 120066161
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Entry
120066161 CDS
T07522
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120066161 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120066161 (tubgcp6)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
120066161 (tubgcp6)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120066161 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
120066161
NCBI-ProteinID:
XP_038873253
UniProt:
A0A8U1FC91
LinkDB
All DBs
Position
21:19650261..19681594
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AA seq
1927 aa
AA seq
DB search
MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRHTLRKR
AYGALLSKLFQEGSPKGFLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSAPP
SPLLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLGEL
AQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTISFLFR
KVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKSSC
EPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWVQGYTLISRDVEDCVPVFLR
HIANDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRMER
IAKHSATSREEQALRTEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFEEL
RQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHLSE
EAAKREWRAMWRVQRMRLDDSRAQFLQQDQQDTEAILEKYPVGGQRPPLEILHPAPAQTT
QPLTQESLSPEPCEQQSEATQAPIHHQSAPPATKLDLTLVSEHIDANDFLPKPADSLQVD
QALQEIGSDLPEALAPHKPVDYDFSAPYSPLEGVTAPALARPRWGPESTLGMGCVVSGTL
ALPSPLPGSTYGHSSDSTMGVGCVVSGAEVLPRPRPHGQASQSSIPLGQYSSDVPLALHT
ANVHGHPSQTTVQLADGSEAKQMDSRQENTEDPSPPGGIVKEVEGTVEASCLVEMKPAEI
EKLDRVGAEEQTAGSLREASASSTPEQGHDSGYHPGQASPSLSGPSSVSELPTANIQGHA
SDAHIKVGEHVSDVEAPLPSQNVHGHSSDANIKVGEFVSEVTAPLPTPNVHGHASDAHIK
VGDHVSDVEAPLPSQNVHGHSSDANIKVGEFVSEVTAPLPTPNVHGHASDAHIKVGDHVS
EVVASLFTQNIHGHASDSHIKVGEHMSEEVASIHTQNIYGHSSDTHFKAGEFVLDAEPSR
PRWSKHGHASDCTLQVGCVMSGTEPVFSPLPGSTYGHSSESTLGIGCVVSGVEPLHAPLP
GSDFGHASDSTLGGGCVVSGTVTLPSPIPGSDYGHSSDSAMGGGCVISGIEPVRAPLPGS
NFGQSSDSTLGTGCVVSGVNPLPSPIPGSIYGHSSDSALGGGCKVKDTGNEYDARTLEQQ
EQQRLAEGISPWAAGLALSPGESSEREYLRSLAAQYQVEQYEDCYGLMTLAPECHPLHQV
TRGPWGLPVDPSLRRATDTTVVQLSGMVSLPVLMKHSVTTPLITHVSLVNKAVVDYYFVE
LGVERHFEALRHFLLMEDGEFAQSLSDLIFEKMGSGQTPGELLTPLVLNSILSKALQYSL
HGDSSLAPNFTFALRFLPETFHPHAPDALNCLELRYKVDWPLNIIITDSCMNKYNRLFSF
LLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQ
VSWLEFTTKLASASDLDAIHRIHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQ
LIAQPWDSQQGEAVHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINF
NSYYKDS
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagcccagacgtctgccttaaatctggcagtcacaacagtagcagtaacagc
aacagcatcactgaactcctgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctaggaggggtgtcccgagagggggtccgccacaccctcagaaagcgt
gcctacggggccctgctgtccaaactgttccaggagggctccccgaaagggttcttgtca
gtacctagtgccacgtccaccaccccacccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcctcgggtctaaaggagctggactctgtgctggagctcttggtgcag
ctgactggctctgcgcccccacccccggcctccttcagcagggactacatgcgcagggag
aggcccgtgctgaggaggcctccgctggggggctaccagagcgaggagctgcagaggttg
gaggcccgagcctgggccctgatgtgtggtgaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tcagacgtagaggagaggtttgagaaggagaccaggatgtctctatttggagccctgcag
cactcccgtacctcagacctggacatcaggctgaatctgcctcctgtgcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacctaaccccagactcccagtcagagcccagtcccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgccgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggaggggggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtctgctctgcacccccc
tcgcccctcctgcctctggactgtcagacccagctggtcagcgacctacttaatgtattg
atcggggtggcgtctactaccttccccctcaaccaggtgtgtgtaaattttgacgttcga
cccggagtgtgtgtgtcgggagcgtcaccggagagtgtgtctcgtttgcttggcgagctg
gctcagtatggcacccattacctgaggctcagccgcttcgttctgcagagtgcccaaaag
agaggcctggtcttccaggcgtttacaggtgggctgcgtaagtacctgcattactaccgg
gcctgtgtcctcagcacccctcccacccttagcctgctcacaatcagcttcctgttccgc
aaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtggatggggcatctggt
gtgggccaggctaccttccctgtgggagtgacgctgctctcctacctgtacaacgaggcc
cagagcaactgcagcaatgagaactaccccgtgctgttgtccctgctgaagagtagctgt
gagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggacgtgtac
ggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcacttctgg
gtgcagggctacacactgatctcccgtgatgtggaggactgcgtgcctgtcttcctccga
cacatagccaacgacgtgtacgtctgcgggaagaccatcaacctgctcaagatctgctgt
ccccagcattacatctgctggtcggagctgcctgtgcctcgcattgctgtcacgttctcc
ctgcaggaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatggagagg
atcgccaagcacagcgccaccagcagggaggaacaggccctgcgcacagagcaggcacgc
caggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatccgtggg
cgccaggtgtcgcagcgtctggctgaagaggcaaagaagagggaacgctttgaagagctg
agacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggagcaggag
gatgaattcagctttgccagggagctgagagaccgggagaagcgactacaggccctggag
gagcagctggagatcagagccaggaaggaactgattgcccagtacagccacctatcagag
gaggcggccaagagggagtggcgggccatgtggagggttcagcgaatgagactggatgat
tcccgggcccagttcctacagcaagaccaacaggacactgaggctattctggagaagtat
cctgtcggagggcagagaccccctctggaaatactacacccagctccagctcagaccact
caaccattaacacaggagtccctatctccggagccctgtgagcagcagtctgaggcaacc
caggcccccatccatcaccaatccgcaccccccgccacgaaactcgacctcaccctcgtc
tcagagcacatcgacgccaatgacttcctgcccaagccggccgacagcctacaggtggac
caggccctacaggaaattgggtcggacctcccggaggctcttgcgcctcataaacccgta
gactatgactttagcgccccctacagtccccttgagggagtgacggccccagccctggct
agacctcgctggggtcctgagtccactctaggcatggggtgtgtggtgtccgggacttta
gctctcccgtctccgctacctggaagtacctacggccattcttcagactccactatgggc
gtagggtgtgtggtgtcaggagctgaggtcctccccaggcccaggcctcacggccaggcc
tcccagtctagcatccccctgggtcagtactcctctgatgtgcccctggctctccacaca
gccaatgtccacggacacccctcccagaccacagtgcagctggcggatggaagtgaggca
aagcagatggacagcaggcaggagaatacggaagacccatcacctccagggggcatcgta
aaagaggttgaagggactgtagaggcatcatgcctggtggagatgaagccagctgagata
gagaaactagatcgtgttggagcagaggaacagacggctggttctctcagggaggcttct
gcctcctccaccccagagcagggccatgacagtgggtatcatccaggacaggcctcccct
tccctctctggaccctccagtgtgtccgagctccctactgccaacattcaaggccatgcc
tcagatgctcatattaaagtcggagagcacgtttcagatgtggaagcccctctcccttct
caaaacgttcatggtcactcatctgatgctaacataaaggtaggagagtttgtttcggaa
gtgactgctcctcttccgacccccaatgttcacggtcacgcatctgacgctcatattaaa
gttggagaccatgtttcagatgtggaagcccctctcccttctcaaaacgttcatggtcac
tcatctgatgctaacataaaggtaggagagtttgtttcggaagtgactgctcctcttccg
acccccaatgttcacggtcacgcatctgacgctcatattaaagttggagaccatgtttca
gaagtggtcgcctcccttttcacccagaacattcacggtcatgcctcggactctcacatc
aaggtcggggagcacatgtcagaagaggtcgcctccattcacacccaaaacatctacggt
cactcatccgacactcacttcaaggcgggtgagtttgtgttggacgcagagccctcccga
ccacgctggagcaagcatggtcacgcctcagactgcacacttcaagtaggctgtgtgatg
tcaggcacagaaccagtattctcccctttacctggtagcacctacggccattcctctgag
tccactctaggtatagggtgtgttgtctctggggttgaaccccttcatgctcctctacct
ggaagtgactttggacacgcctcagactcaaccctgggtggagggtgtgtggtgtcagga
acagtaacccttccttctccgatacccggaagtgactacggccattcgtcagattcagcg
atgggcggagggtgcgtgatatctgggattgaacccgttcgcgctcctcttcccggcagc
aacttcggacagtcctcagactccacactgggcacagggtgtgtggtgtcgggtgtaaac
cctctgccctcccccatccctggcagtatctacggccacagctcagactctgccctggga
gggggctgtaaggtgaaggacactggtaatgaatacgacgccaggaccctggagcagcag
gagcagcagcggctggccgagggcatctcgccctgggcagcgggcttggctctgtcccca
ggcgagagctcagagagggagtacctccgctccctggctgctcagtaccaggtggagcag
tacgaggactgctacggtctcatgacgttggctccagagtgtcaccccctgcatcaggtg
acgcggggcccctggggcctcccggtggacccgtcgctccgcagggccacagacaccacg
gtggtgcagcttagtgggatggtctctctgcccgtcctcatgaagcactctgtcaccacc
ccactcatcacacatgtgtccttggtgaacaaggcggtggtggactactacttcgtagag
cttggagtggagaggcattttgaggccctcaggcacttcttgctcatggaggacggggag
ttcgcccagtctcttagtgacctgatctttgaaaagatgggcagtggtcagactcctgga
gagctgttgactcctctggtcctgaactccatcctgagtaaggctcttcagtacagtctt
catggagacagttctctggcccctaacttcaccttcgccctgcgcttcctcccggagacc
ttccatcctcacgcccccgacgcactcaactgcctggagctacggtacaaggtggactgg
ccgttgaacatcataatcacagacagctgtatgaacaagtacaaccgtctgttctccttc
ctgctgcagctcaaacacatggtgtggagcctcagagacgtctggtttcacctcaagagg
actgcgctggtgaaaggggcgggccgctcggtgcagttccgccagctgcagctgtacaga
cacgagatgcaacactttgtgaaggtgatccagggatacatcgctaaccagatcctgcag
gtgtcctggttagagttcaccaccaagctggccagtgcctcggacctggacgccatacac
cgcatacacgccgactacctcaacagagctatcttcaggggtctgctgacagagaaggca
gctccagtcatgaacatcatccacagtatcttcagcctgatcctgaagttccgggcccag
ctgatcgcacagccctgggacagccagcagggggaggcagtgcaccccagcttcatcgcc
atgcagcagtcatacaacactttcaaatactactcccacttcctcttcaaagtggtgacc
aagctggtgaaccgaggatatcagccacacctggaggacttcctgctccgcatcaacttc
aacagctactacaaagactcctga
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