KEGG   Salvelinus namaycush (lake trout): 120066205
Entry
120066205         CDS       T07522                                 
Name
(RefSeq) Fanconi anemia group A protein-like isoform X1
  KO
K10888  fanconi anemia group A protein
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120066205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120066205
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     120066205
SSDB
Motif
Pfam: Fanconi_A_N FANCA_arcN FANCA_helical FANCA_CTD
Other DBs
NCBI-GeneID: 120066205
NCBI-ProteinID: XP_038873331
UniProt: A0A8U1H8X5
LinkDB
Position
Sna21:22490455..22518341
AA seq 1452 aa
MSLGASSMCPTQKRTLSCLLAGRVGKRPKQENAQDLQEAAVQLLNRHQNLSDLFLEVGSP
NPCNLIFKEYSGQKKAASESPSPTIGGSLLVSELRRKAGELGVPVAALSVKMVVERLLDL
TGHIKGDREQVLLNSTQRVQLSVLFQSTRELLSLEAFCSKLFWQEYWRDQKQPMLEVVYH
LHTQNILSLEYMLESENGVRSWLMSELKALCGRTATEEGDGVPQQVLSTVVSVLVRAVFE
ETQDSTAAPCRRLSHVCRSVLDDMLSWVLDTLNCKQTLQSGETTAELWVQMFDASLCGVS
VSPDALRRFFTHSLTHTLTYRPRLKVSDAIAMQREWGFAKTCRLLTSLFRKLAVIFKVEE
LLSHLQQVLETHEVNWQHVLSCLSTLLVYNPNTQPSLKELLSRLLSSAFEGYDLENMITA
FLLARQGALEGPGVFPSYSEWFKMSFGGASSYHGNSKKSLVFLLKFLSDLVPFDPPQYLK
VHILHPPYVAVKHRALLQEYVSLTKTRLADLKVSIEEMGLYEDISGAGASVQPQCQARQD
VEKATSFFGSTGRISATVMEASIFRRPYFLSRFLPALLTPRVLPVKPDARMNFIDSLKKA
EKIPAAQHSSYIESCQRERQRQQDSKGVTVVNDDDNPQEVLQVQLQEHRALLTEGGSDGE
VSAQLARISHTLSIVFPERAEELVSQAVIKLHVDESTFSELHNKVVNMILRSFCQSLLNA
SRISPPNKQSPWASQFVNILLGHRQLLTALLHRMWDLLHNQGVSLSAAHVLGLAAFVVHL
HTSQAQCPKVQLCPPLLPGPVSVPEALTTALPCTTQTNMLFCVRFCVAAVCYGLCRSESL
CDQPQQYNPCGLYKKLLYLIPRLMPDMRRLPIEASGESEYVGANKQGEEENRGLWKSVTD
TNTTWRKSAWALWKHAPFRLLVKLPEYQFSFSEWLAAELRVQRSEDALSDPDRQEYQQWA
CQQQYLPSPLDKGGCAGDLRTACSHILNAVMDQKTVCAPTLENTDHRPSEVGTCLPDILS
RLQEIVYEMELTSRSQRTQDKGHFLLDLISHRCSVTSDLRSISSELSIQLTLHTWNRVIL
ALPAVMLVTVKTGGGKRTLDCETLMEHINQYQRKGCSPAGLLPYHLTAHFLRAVVMASVS
CDCASGEVNKAMSLISLQCPLLLVSAGHWWGRLSPVLVCLWHRLTDGQPLPQQLQVLADC
HLWVCSSKDGVSCPVPSAPPLLLAACLHCVWEGQASGKGIRTSLEMLGQLTEQHSQLLVF
LLFLSVTDLLTTFLTPQRVKGLQRAQELCNDILTVLVDSADWLLLFKSPCSEKGLYQPVA
MVTSDEYTRLMPLAFYSLVPHLNFEVLEKTLKAPGFLHTAVHCYSSLIKLFMDGQTPCPV
TEHLTDQMDPSYILTRAQQVLLKTISLTSPTSLSQHQLNQLEALCVDLDPEVAAALVFHL
SSSSLSPELDFL
NT seq 4359 nt   +upstreamnt  +downstreamnt
atgtcgctaggtgcgtcaagtatgtgtcccactcagaaaaggacactctcgtgtctgctc
gcagggcgtgttgggaagaggccaaagcaggagaatgcacaggatctgcaggaggcagca
gtccagctgctgaacagacaccagaatctctcagatctgtttctggaggtggggagtcca
aatccttgcaatttaattttcaaggagtactcgggacagaaaaaagcagccagtgaaagt
ccctcacctacaattgggggttcacttctggtgagtgagttgaggaggaaggctggggag
ctgggggtcccggtggcagccctgtcagtgaagatggtggtagaaagactgttggacctg
accggccatatcaaaggggaccgagagcaagtgctgctcaactccactcaaagggtccag
ctctccgtgcttttccaatcaacccgtgagcttctctctcttgaagccttctgctctaaa
ctcttctggcaggagtactggagggatcagaaacagcccatgctggaggtggtgtaccac
ttacacactcagaatatcctctctctggagtacatgttggaaagtgagaatggggtgagg
tcatggttgatgtctgagttgaaggctctgtgtggtaggacagctactgaggagggagat
ggagtacctcagcaagttctatcaactgtggtatctgtgttggtgcgagctgtttttgag
gaaacccaggactccacagcagcaccatgcaggaggctgtcccacgtgtgccgttcagtg
ctggatgacatgctctcctgggtactggatactttgaattgcaaacaaaccctgcagtct
ggtgaaacaacagctgaattatgggtacagatgtttgatgcttccttgtgtggtgtgtct
gtatcacctgatgcactgcgccgtttcttcacccactctctcacacacactctcacctac
agaccgagactcaaagtatctgatgccattgccatgcaaagagagtggggctttgctaaa
acctgcagactgttgacctccttgtttcgtaagttggcagtgatattcaaggtagaggag
cttctctctcacctgcagcaagtattggagacgcatgaggtcaactggcagcatgtgctc
tcctgtctctccaccctgctggtgtacaatccaaacacccagcctagcctaaaagagctg
ctgtccaggctcctaagctcagcgtttgaggggtatgacttggagaacatgatcactgcc
ttcctcctggcccgtcagggtgcgcttgaagggcctggtgttttcccctcctacagcgag
tggtttaagatgtcttttggtggtgctagcagttaccacggcaacagtaagaagtctttg
gtgttcctgctaaagttcctgtcggacctggtgccctttgaccccccacagtatctgaag
gtccacatcctccatccaccctacgtggcagtgaaacaccgggccctactgcaggagtat
gtatccctcaccaagaccagactggctgacctgaaggtctcaattgaggagatgggcctt
tatgaggatatctctggagcaggagcctcagtgcagccccagtgtcaggcacgtcaggat
gtggagaaggcaacctcgttttttgggagcacaggaaggatatctgccactgtcatggag
gccagcattttcagaaggccttatttcctgtctcgtttcctccctgccctcctaacccca
cgtgtgcttcctgtgaagcctgacgccaggatgaatttcatagattctcttaaaaaagcg
gaaaagatcccagctgcccagcactcctcctacatagagtcatgtcagagagagagacag
aggcaacaggacagtaaaggagtcactgtggtgaatgatgatgataacccacaggaggtt
ctacaggtccaactacaggaacatagagccctgctaacagaggggggcagtgacggagag
gtgtcagcccagctggccaggatctctcacactctgagtattgtgttccctgaacgtgct
gaggaactggtcagccaggcagtcatcaagcttcatgtagatgagtctactttctctgag
ctgcacaataaagtggtgaacatgatcctgaggagcttctgccagagccttttgaacgcc
tccagaataagcccaccaaataaacagagcccctgggcatcccagtttgtcaatatcctg
ctgggacacagacagctgctcactgccctcctgcaccgcatgtgggacctgcttcacaac
cagggggtatcattgagtgctgcacatgtgcttggactggcagcctttgttgtgcacctt
catacctcccaggcacagtgccccaaggtgcagctgtgcccacccctgctgcccggccct
gtgtcagtaccagaggcactgaccactgctctaccctgcaccacccaaaccaacatgcta
ttctgtgttaggttctgcgtggctgcagtttgctatggtctctgcaggagtgagtcactg
tgtgatcagccgcagcagtataatccctgcggcctctataaaaagctgctgtacctaatt
cccagactaatgccagatatgaggaggttgcccattgaagcgagtggggaatcggagtat
gtgggggcaaacaaacagggtgaggaggagaatcgtgggttgtggaagagtgttactgac
acaaatacgacctggaggaagtcagcctgggcgctatggaaacacgcccccttccgtctc
ctagtaaaactcccagaataccagttctcattttcagagtggctggcagctgaactcaga
gttcagaggagtgaggatgccctgtctgacccagatagacaggagtatcaacagtgggcg
tgtcagcagcaatacctgccatctcctctggacaaggggggctgtgcaggagacttaagg
acagcctgctcacacattctcaacgctgtcatggaccagaagacagtatgtgctccgacc
ctggagaacactgatcacagaccctcggaggtaggcacctgtctcccagacattttatcc
agacttcaggagattgtctatgagatggagctcactagtcgctctcaaaggactcaagat
aagggacatttcctattggatctgatttcacatagatgctctgtgacctctgacctgcgg
agtatcagcagtgagcttagcattcagctaacattacatacatggaacagggtgatactg
gcactccctgcagtcatgttggttacagtgaagactggcggagggaagaggactctggac
tgtgagaccctcatggaacatatcaaccagtatcagaggaagggctgttccccagctgga
ctgctgccctaccacctcacagcacacttcttaagagctgtggtcatggccagtgtgagc
tgtgactgtgcatcaggagaagtgaataaggccatgtccctgatcagtcttcaatgtcca
ctgctcctcgtctctgccgggcactggtggggccgtctctcccctgtattggtgtgtctc
tggcatcgcctcactgacggacagcccctgcctcagcagctgcaggtcctggctgattgt
cacttgtgggtctgcagttcaaaggatggagtgtcatgccctgtcccctctgccccgccc
ctgctcctggcagcttgtctgcactgtgtatgggaaggccaggcgagtggcaagggcatc
aggacaagcctggagatgttgggacagctgacagagcagcacagtcagctgctggtgttt
ctgctgttcctctctgtgactgacctcctcacaacttttctcacgccccagagggtgaag
ggcctacagagagctcaggaactctgtaacgatatcctgactgtccttgtggactctgct
gactggctgctactattcaagtcaccttgctctgaaaaagggctataccagcctgtggcc
atggtaacatcagatgaatacacaagactgatgcctttagccttttacagcctggtcccc
catcttaactttgaggtattggagaaaacattgaaggccccagggttcctccacactgct
gtgcactgctactcctcccttatcaaactctttatggacggccagactccctgccctgtg
accgagcatctgactgaccagatggacccctcatatattctgactagggcccagcaggtg
cttctgaagactatatctctgacatccccaacctcactgtctcaacatcagctaaaccag
ctggaggccttatgtgttgatctggacccggaggtggcagcagctctggtctttcacctc
agctcttccagcctcagcccagagctggacttcctgtga

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