Salvelinus namaycush (lake trout): 120066227
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Entry
120066227 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04115
p53 signaling pathway
snh04120
Ubiquitin mediated proteolysis
snh04137
Mitophagy - animal
snh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120066227
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120066227
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120066227
09143 Cell growth and death
04115 p53 signaling pathway
120066227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120066227
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120066227
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120066227
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
120066227
NCBI-ProteinID:
XP_038873369
UniProt:
A0A8U1FCW9
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Position
Sna21:25014726..25033103
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AA seq
286 aa
AA seq
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MDEEMSRQTATALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagaccgccacagcgctgcccacaggaacctccaagtgt
gccccctcccagcgcgtccccaccctgtccggcactacggcctctaacagcgacctggcc
agcctgtttgagtgccccgtctgcttcgactatgtgctgccccctatcctgcagtgccag
agcggccacctggtctgcagcaactgccgacccaagctcacctgctgccccacctgccgg
ggcccactgggctccatcaggaacctggccatggagaaggtggccaactctgtgctgttt
ccctgcaagtatgcgtcgtcgggctgcgaggtgacgctgccccacacagacaaggcagag
cacgaggagctgtgtgagttccggccgtactcctgtccctgcccaggggcctcctgtaag
tggcagggctcgttggacgcggtcatgccccacctcatgcaccagcacaaatccatcacc
acgctgcagggcgaggacatcgtgttccttgccacggacattaacctgcctggggcagtg
gactgggtcatgatgcaatcctgcttcggattccacttcatgctggtcctggagaagcag
gagaagtacgacggtcaccagcaattctttgccatcgtgcagctgatcggcacgcggaag
caggctgaaaactttgcctaccgcctggagctcaacgggcaccggcgacggctcacctgg
gaggccacgccccgctccatccacgagggcatcgccactgccattatgaacagcgactgc
ctagtgtttgacacctccatcgcgcagctgttcgctgagaacggaaacctgggcatcaac
gtcaccatatccatgtgctga
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