Salvelinus namaycush (lake trout): 120066267
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Entry
120066267 CDS
T07522
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2-like
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120066267
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120066267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
120066267
NCBI-ProteinID:
XP_038873449
UniProt:
A0A8U1H774
LinkDB
All DBs
Position
Sna21:complement(28295097..28334088)
Genome browser
AA seq
1799 aa
AA seq
DB search
MKNKNKKQEDECSTQSNASSNSASEESNHSGSESGSQSESEQGRERRRSHHSGKSNSSSE
SGSQSGSQSESQQASAEVNDKPPVKKKDNLADVKKMWEEHPDVYGVRRSNRSRQEPARLN
IGAGGSSDSEGESPQRKATRQKKKENTWKSDDSEEEEEDASSADSEQEEKVRSRRLPARR
PQTKSSTVKKQQPPKARKTRKQESSVEEDDDDDDDEDTPKRQTRRRVAAKVSYKEDQNDF
ETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQYAVEENGDPGADYEPE
KDEGETHYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLENFKKKNDELNAWLNKASPED
SEYYNCQQELTTDLNKQFQILERVIATKTGKTQGPSDFPSHSHKNASSSNEPEYLCKWMG
LPYSECSWEDGALLGKKFQHCIDSFTNRNSSKTVPSKDCKVLKQRPRFVALKNQPLYIGD
ENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHHHQLYGPSLVV
VPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVCHQTKRIKFNALITTYEIL
LKDKAVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHRLLITGTPLQNSLKELWSL
LHFLMPDKFENWEDFESDHGKGTDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRV
DMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKCTNHGFLIRQPEEECDTQQ
EHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLALKRYPFQRLDGS
IKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGNSNS
NPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLAETRESDHGSCATDELLSQ
FKVANFSNMEESAPDLVERTVPDWDDIIPEDQRQKLEEEQKQKEMEDIYMLPRSRSSNKR
PQANDSDSDIGSKLKHRSSGSESETDDSGDDKKPKRRGRPRARKNNVEGFTDAEIRRFIK
AYKKFAAPLERLECIARDSELVEKSQADLKRLGELIHNSCVTAVQEHEEHLRENPSEAKG
PGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPANPAERNKFQLTCRVKVPHFDVDW
DLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKIIPDDPDKKPQGKQLQGRVDYLLKTL
KKEVDSKDVTKDEVKVKQKKPRVKKENKAPKDEQGNYISSPRLSDNPSEEGEVRDDGTEK
TPSKKRQKKKDNKENKEKQGTHKKEVEKDKKRPKTKKEKAKGAKGKKPQGPVHITAGSDP
VPIGEDDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQHTRTCLLKIGDRIT
ECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRSQEEEKEHRKKGDDM
SGKKKSFRAEASSSSRDSTSTQPLSKSHPGMPHPSPTSPQGHHREGYNKSNNRHFGNDDR
GDWQRDRKYNYPGNSNQSWQGERHHPYDAHRYKDHHYGDRRPREDSYRSSCSSYRSGSSN
STRKRPYDQYDNDQDHRDRRAYYDRHPDAKRRRGDDFRPPQDFRSGGGHPQDFRGRMLEQ
RGPTGQEHFTRPYPDNPPLLDPHSPQAQKSPQDSRSPNAERTAEHKAAGADLNWNNRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagaataaaaagcaagaagatgaatgttcgactcaaagcaacgcatcaagc
aattcggcctctgaagaatcaaaccactctgggtcggagtctgggagtcagtcggagagt
gaacagggcagggaaaggagaagatcgcaccactctggaaagtccaacagttcctctgaa
tctgggagccagtctgggtctcagagtgaatcccagcaagcctcagcagaggtcaacgac
aaaccaccagttaaaaagaaagacaatctggcagatgtaaagaagatgtgggaagagcat
ccagatgtctatggggtcaggcgatcaaatcgcagtaggcaagaacctgctcgtctcaat
attggagccgggggtagcagtgactcagaaggtgaaagtcctcaaagaaaagcaacacga
caaaagaagaaagaaaatacctggaagagtgatgactcggaggaggaggaggaggatgcc
agcagtgcagacagtgagcaggaagagaaagttagatccagacgacttcctgctagaaga
ccacagaccaaatcatctacagtcaaaaaacagcagcctccaaaggcaaggaaaaccagg
aaacaagagtcatctgtggaggaagatgatgatgatgacgatgatgaagataccccaaag
agacaaacccggcgaagggtggcggccaaagtcagttacaaggaggaccagaatgacttt
gagacagactctgacgacctgatagagatggagggagctgaggtggagccggaagatgac
agcgagaccattgagaagatcatggacaccagaacaggcaaaaaaggagcctgtggggct
tccactacccagtatgctgtggaggaaaacggggaccccggagcagactatgagcctgag
aaggatgaaggagagacccattacctgatcaagtggaaaggctggtcctatatccacaac
acctgggagagcatcgactccctcactcaacagaaggtcaagggactgaagaaactagag
aacttcaagaagaaaaacgatgagctcaatgcttggttgaacaaagcatcccctgaggat
tcagaatactacaactgccaacaagagctaaccactgacttaaataagcagttccaaatt
ttggaaagagtcattgcgactaaaacagggaagacacagggaccgtctgatttcccttct
cacagccacaagaatgcgtcgtcgtccaatgagccagagtacctgtgtaagtggatgggc
ctgccctattcagagtgcagctgggaggatggagctctgctggggaagaagttccagcac
tgtatagacagcttcaccaacaggaactccagtaaaacagtcccctccaaagactgcaaa
gtgctgaaacagaggcccagatttgttgcactgaagaaccagccattgtacattggggat
gagaacctgcagctgagagattaccaactagatggactgaactggctggctcactcctgg
tgcaggtgcaatagtgtgatcctggctgatgagatgggtctggggaaaaccatccagacc
atctcattcctttcctacctgttccaccatcaccagctgtatgggccctctctggtggtg
gtgcccttgtccaccctcacctcctggcagagagagtttgacacctgggcccccgacatg
aacgtggtggtctacctgggagatgtgatgagcaggaaatcgatccgtgactatgagtgg
gtatgccatcagacgaagagaataaagttcaatgcacttataaccacgtatgaaattcta
ctgaaagacaaggcagtattggggaacataaactgggccttcctgggtgtggacgaagct
cacaggctgaagaatgatgactccctgttgtacaaaaccctgatcgagttccggtccaac
cacagacttctaatcacagggacaccactgcagaactctctcaaagagctgtggtccctt
ctgcacttcctcatgcctgacaagtttgagaattgggaagattttgaaagcgaccatggt
aaagggactgacaatggctaccagagcctccacaaagtccttgagcccttcctcctgagg
cgtgtcaagaaggatgtggagaaatccctgcctgccaaggtagaacagatcctccgtgtg
gacatgtccgccgtgcagaagcagtactacaagtggattctgaccaggaacttcagagcc
ttgcagaaaggcacccgaggcagctcctctggtttcctcaacatcgtcatggaactgaag
aagtgcactaaccatggtttcctcatcaggcagcccgaggaggagtgtgacactcaacag
gagcacctgcaggcgttggtgaggggcagtgggaagctggtgctactggacaagctgctg
accagacttcgggagaggggcaaccgagtcctcatcttctcccagatggtgcggatgttg
gacatcctggctgagtacctggccctgaagcgttacccattccagcgcctggatggttcc
ataaagggagaaatacgaaaacaggcacttgaccactttaatgctgaaggctctgaggac
ttctgtttcctgctgtccaccagggctggagggctggggatcaacctggcatctgcagac
actgtggtcatctttgactctgactggaatcctcagaatgacctgcaggctcaggccagg
gctcacaggattggccagaagaaacaggtgaatatctatcgcttggtcacaaagggatct
gtggaggaagaaattattgagcgagccaagaagaagatggttttggaccatcttgtcatt
cagagaatggacaccactggtcgaactgtattggataacaactctggaaattctaattcc
aacccattcaacaaagatgagttgactgccatcctgaagtttggagctgaagatctgttc
aaagaggcagaaggagaggagactgaacctacggagatggatattgatgagatcttgcgg
ttggctgaaaccagagaaagcgaccacggatcatgtgccacagatgagcttctctctcag
ttcaaggtggccaacttctccaacatggaggagagtgctccagacctggtggagcgcacg
gtgcctgactgggacgacatcatccctgaggaccagaggcagaagctggaggaggagcag
aagcagaaggagatggaggacatctacatgctgcccaggagcaggagctccaacaagagg
ccccaggctaacgacagtgacagtgacattggctccaagctgaagcaccgttcctcaggc
tctgagagcgagacggacgacagcggcgatgacaagaagccaaagaggagaggcaggccc
agagcccgcaagaacaacgtggagggttttactgatgcagagatccgcaggttcatcaag
gcttacaagaaatttgcagctccgcttgaaaggctggagtgcattgcccgggactctgag
ctggtggaaaaatcccaggcagacctgaagagactgggagagctgatccacaacagctgt
gtgacggctgtccaagagcacgaagagcacctcagagagaaccccagtgaagccaaaggt
cctgggaagcgcagaggtataaacatcaaaatctcaggagtgcaggtcaatgccaagtcc
atcattcagcatgaggaggagtttgagccactgcacaaagttgtgccagctaatcctgct
gagagaaacaagttccaactgacctgcagagtgaaggtgcctcactttgacgtggactgg
gatctgcaggatgacactcaactgttgctgggggtctatgagcatggctacggcaactgg
gatctgatgaagaccgatccggatctcaaacttgcagacaagattatccccgatgaccca
gacaagaaaccccaagggaagcagttgcagggcagagtggactatcttctgaagacgttg
aagaaagaagtggacagtaaagatgtcactaaggacgaggtcaaagtgaagcagaagaag
cctcgcgtgaagaaagagaacaaggcccccaaagatgagcagggaaattacatttcctcc
cctcgcctgtcagacaacccctccgaggaaggggaggtgagggatgacgggacagaaaaa
actccctcaaagaagagacagaagaaaaaggataacaaagagaacaaagaaaaacaggga
actcataaaaaagaggtggaaaaagacaaaaaacgtcccaagacaaaaaaagaaaaggct
aaaggagccaaagggaagaagccccaggggccggtccacattactgctggaagtgaccct
gttcccatcggagaggatgacgacgagctggaccaggagaccttcagcatttgtaaggag
cgcatgaggccggtgaagaaggctctgaaacagctggataagcctgacgagggcctgtct
gttcaggagcagctccaacacacgcgcacctgcctgctgaagataggagaccgcatcact
gagtgtcttaaagcctacagcgacccagagcatgtcaaaacatggcgtcggaatctctgg
atttttgtgtccaagttcacagagttcggagcgaggaagcttcacaagctgtacaagatg
gcacagaagaagcggtctcaggaggaggagaaggagcatagaaaaaagggggatgacatg
tcgggcaagaagaagtctttcagagcagaggcgtctagttccagtcgagactccaccagc
acccagccattgtctaagtctcatccaggcatgcctcatccctctcccacatccccccaa
ggtcaccacagagaaggctataacaaatccaacaacagacactttggaaatgatgatcga
ggagattggcagagagatcgtaaatacaactaccctggaaatagcaaccaatcctggcaa
ggcgagcgacatcatccatatgacgcccatcggtataaggaccatcactatggagaccgt
cgtccacgtgaagactcctaccgcagtagctgtagtagttaccgtagcggcagcagcaac
tccacgcggaagaggccatatgaccagtatgacaacgaccaggatcacagggaccgccgg
gcctattacgacagacatccagacgcgaagcggagacggggcgatgacttccgtcctccc
caagacttcaggagtggaggaggccatccccaggacttcagggggaggatgctggagcaa
agggggccaacagggcaagaacacttcacccggccctatccagacaaccctcccctgctg
gacccacactccccacaggctcagaagtcaccccaggactcgcgctcgccaaacgcagag
cggactgcagagcataaagcagcaggggctgatttaaactggaacaacaggaagacatga
DBGET
integrated database retrieval system
