KEGG   Salvelinus namaycush (lake trout): 120066291
Entry
120066291         CDS       T07522                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120066291
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120066291
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120066291
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120066291
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120066291
    Little elongation complex (LEC)
     120066291
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351 DENND11 UBR1-like_wing
Other DBs
NCBI-GeneID: 120066291
NCBI-ProteinID: XP_038873500
UniProt: A0A8U1FBK1
LinkDB
Position
Sna21:30369060..30410672
AA seq 603 aa
MAALRQEHRYGLSCAKINKNVPNKTLYHVKLTDTAIRTLEAYQNLKGSLTNQPAICFKGS
QGYIKIPAPSPDAPDALRVFSFYLSSDSKDKPQASFDCTHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSSMDSSSNK
HSPSNKRSGAPSPVALRPLRDRIIHVLALKFYRKPELLLWLERERASPKDKADLGAVLDD
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSVKRPFPSELSDCQTPKKQRLLDHSLPLQSLSNGHLGPIGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKEREHLKQDWIENSPDLKQYQEHFNDHEGAKT
PVTRTSPEELPDYFIMYNIITASEQRQQYKEDFCAEYDEYRALHHRIGTITEMFVQLGSK
INTLSPGTQEYKLMEDEILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDRTQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaaaaac
gttccaaataaaactctctatcacgtcaagctaactgataccgccattcgaacgctcgaa
gcctatcaaaatcttaagggatccttaacaaatcagccagcaatttgcttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgccccggacgcactacgagtcttc
tccttctacctgtccagtgatagcaaggacaaacctcaggccagcttcgactgcacacac
cagtatgtctcaagggagggcagggagcacctggaaggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgacccgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccacacgtggtaaa
tgtgtgaagatccagaggaagcagggcctgtcctcaagcatggacagcagcagcaacaag
cactcccccagcaacaagaggagcggggcccccagcccagtggcactcaggcccctaaga
gaccgtatcatccacgtcttggccttgaagttctacaggaagcctgagctgctgctgtgg
ctggagagggagagggccagtcctaaggacaaggctgacctgggagcagtactggacgat
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcat
gtccagaaggattggcccggttacctagaggaagagaagcagctcatccataggctcctg
gctaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactaagcccggtcaaaactccctct
gtgaaacgcccatttccctctgagctatctgattgtcagacccccaagaagcaaagacta
ttagaccacagtttacccctgcagtccctttccaatggacaccttggtcccattggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctctacacacggcacaaactggatggttcc
tccagtattccgaagctggagaggacagagccggtcccagcagtaccaagccccaaggcc
ccacaaactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggaacgggagcacttaaaacaagactggatagag
aacagtcccgacctgaagcagtaccaggaacatttcaatgaccatgagggggctaaaaca
cctgtcactcgtacgtcacctgaagagctgcccgactatttcataatgtacaacatcatc
acagcctcagagcaacggcaacagtacaaggaggatttctgtgcggagtatgatgagtac
agggccctgcatcaccggatcggtactatcacagagatgtttgttcagctgggctcaaag
atcaacactctctcccccggtacacaggaatacaagctcatggaggacgaaatactgcag
aaatacagaaaatataagaaaaagttccctggttaccgggaagagaagaagcgatgcgag
tatctgcatcagaaactgtctcacatcaaaggtctgatcctggactatgaccgtacccag
gccccttcatag

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