Salvelinus namaycush (lake trout): 120066308
Help
Entry
120066308 CDS
T07522
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066308
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120066308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
120066308
NCBI-ProteinID:
XP_038873527
UniProt:
A0A8U1FBL8
LinkDB
All DBs
Position
21:complement(33166539..33199166)
Genome browser
AA seq
632 aa
AA seq
DB search
MNICDYLMADQRMDITSTMNEFMSPSSTELISSSINTQGMDYTRKRKGSTSDYQIDGFSF
DESSMDTDKDKLRDCGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRK
LDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPTKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIIPQPSHEDIRVKPTEYVSRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKI
KDGSFITLRSCWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADPYPQSAASPTASMDSVLT
SEGGGRRAIQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRTRGSTPSSCGSSPLNISTPPP
DCSPGGKRIQNGGTPDLPSAGTLPGGPDSIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattatctaatggcagaccaaagaatggacattacctctacgatgaat
gagttcatgtcccccagctccaccgagctgatcagcagctccatcaacacccaaggcatg
gactacacccgcaagaggaagggcagcacctccgactaccaaattgatggattttctttc
gacgagagcagtatggatacagacaaggataagcttagggattgtggtgatcatcagggg
cggatcaaaaatgccagggaggcacacagtcagattgagaagaggcgcagagacaagatg
aacagctttatagacgagctggcggcgctagtgcctacttgcaacgctatgtcccgcaag
ctggacaaactcacagtcctacgcatggctgtccagcatatgaagacattacgaggcgca
gcgaacccatacacagaggcgaactacaagccgtctttcctgtccgatgatgaattgaag
cacttaatattgagggctgctgatggctttctgtttgtcgtcggatgcgatcgtgggaag
atcctcttcgtctctgagtctgtttacaagatcctcaactatagccagaacgacctaatt
ggccagagtctgtttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcaccccgggagcgactcatcgacgccaaaactggcctgccagtg
aagactgacattacccctgggccgtctagactgtgctccggagccagacgttctttcttc
tgccggatgaaatgtaaccggccctacgtcaaaacggaggacaaggacttcccctccacc
tgctcaaaaaagaaagccgaccgcaagagcttctgcacgatccacagtactggctacctg
aagagctggccgcccaccaagatgggtttagacgatgacaacgagcccgacaacgagggc
tgtaacctcagctgcctggtggccatcggccggctgcacccccacatcatcccccagccc
tcccatgaggacatccgcgtcaaacccactgaatacgtctcccgccatgccatcgacggg
aagttcgtctttgttgaccagagggccacagccattcttgcgtacttaccccaggagctt
ctaggcacctccttctacgagtattttcatcaggatgatattggccacctggcagaatgt
cacagacaagtgctgcagatgagagaaaagatcaacacaaactgttacaagttcaagatt
aaagatggctccttcatcacgctgagaagctgctggtttagtttcatgaatccctggacc
aaagaggtggagtacattgtctccacaaacacagtggtctcatgcagtatgctagacggt
gcagacccctatcctcagtctgctgcttcccccacagcctctatggacagtgtgctgacg
tcagaaggtggagggagacgggctattcagacggtgccaggcatccctggtggaacacgg
gcaggtgccggcaagatcggccgtatgatcgcagaggaggtgatggagattcagaggacc
agaggctcaacaccctctagctgtggctccagccccctgaacatcagcaccccccctcca
gactgctctccagggggcaagaggattcaaaatggtgggacaccagaccttccgtcggca
ggaacgctacctggaggacctgactccattggatacccatactccaaccagtccattatg
agtgacaactctcatctcagcattgacatcatggacgagccaggctccagcagccccagt
aacgatgaggcagccatggctgtgataatgagtctcctggaggctgacgcaggccttggg
ggccccgtggactttagtgacttaccctggcccttgtga
DBGET
integrated database retrieval system
