Salvelinus namaycush (lake trout): 120066320
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Entry
120066320 CDS
T07522
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120066320
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120066320
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
120066320
NCBI-ProteinID:
XP_038873546
UniProt:
A0A8U1FC96
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Position
Sna21:35042669..35081058
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AA seq
1785 aa
AA seq
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MLIFQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSANSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESTFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDIVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTIGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGGCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
LATSSAWDTFQRYRCLENSQSVVKTPSTDICHNFIFSISALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHAFCHEATGQCACIP
GAYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLDCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICSPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTKGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVSDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKRGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGHCVCLEGVSGPRCNLCARGYSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGTYKHAIDNMEQSAGSIRTILAQNPATQPLSEIQQLLEQAIDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHAKRLDDLA
DQLETLDLSELSEKTCGSPAGEACADSPCGGLSCVDSEGNRRCGGEGCDGLVTLANNAWH
KANHFDQEILTAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
QSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKALNTSLSSEQTERDAESINKV
AEQVKKDLDSELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatttcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccagagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctctgccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctacgtcaaaagcgtggttaacgccaccaccggccaccgagtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcattatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggctgactttgggaagaactggcag
gtgtaccgttacttcgcctacgactgtgagtcaacattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
acactgggagacaacctgctggactcccgcatggagatcaaggagaagtactactatgct
gtctacgacttggtggtacggggtaactgcttctgctacggacacgcctccgagtgcgcg
cccgtcgatggggctggggatattgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggttgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactattggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaatggtgggatttgtgacaggatgactgatgtgtcgtctggactg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccactacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcgggaggctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaagagactggtcagtgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggatgcc
aaatttggacctggtgtgacagtagtgcagagaccccaccctcaggaccgtagccccacc
tggacagggataggtttcgtcaatgttcccgagggggcctacctggagttctccattgac
aacatcccccactccatggagtatgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
ttggccaccagcagtgcctgggacaccttccaacgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagacatctgccacaactttatcttcagcatatccgct
ctgctgcaccagggagctaaagcatgccagtgtgatccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctctttggacccagtggctgtagatcctgtgattgcaat
ccccagggatcggagcatgcgttctgccatgaggctactggccagtgtgcttgtatcccc
ggggcgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
gactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactacggc
gaccctgtcctgggttcaggggatcactgtcgtccctgtatgtgtccggacgggccaggt
agcgggcggcagtttgccggtggatgttatcacggtctggactctcactaccaggtgttt
tgtatctgcagccctggatacagaggtgccagatgtgaggaatgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacaggtgaatgtctcaaatgtctctaccac
accaagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
agcgactgccactgtgatctgggcagtgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgaccagtgtgcccccgacacctggaacatggccagcaagaggggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagttgttctgg
ggagaccctgaagtcaaatgcaatgcgtgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtcactgtgtgtgcttggagggcgtgtctggtccccgctgt
aacctctgcgcccggggctactctggcaccttcccctactgcgaacgctgccaccagtgc
tttgccgactgggacgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaacatacaaacatgccatagataac
atggagcagagcgccgggtccataagaactatcctggcccagaacccggctacacagcca
ctgtcagagatacagcagctactggagcaggccatagatctaatggaagagatgagcaac
aagctgaacctcactgaggaggcgttggcccaggtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggaactcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggctcaggccaacgcctccaccactgaccca
ggcaaccccgtggagagctctttcgttctacgacaagctacggaggacaagatgaacgac
accagggacgagttccacaggaggcaggaagaacacgccaagagactggacgacctggcg
gatcagctggagacattggacctatcagaactcagcgagaagacgtgcggcagcccagct
ggtgaggcgtgtgcagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggcgaggggtgtgacggtctggtcaccctggccaacaatgcctggcat
aaggccaaccactttgaccaggagatcctcacggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagatgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaatgagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaac
cagagcgctgacgatgtgcagagagccgagaacctactgaagcaggcaggcagagccagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggccaccaccgacattaaaggc
acaaacgacctcctgtcctcagtggagtcggagacagcggactcagagttcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
ctgaacacctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggactcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggcgtggccgatgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaagctgcagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtcaaagagctgctgcaggagatcagtcacaaagtcaccgtgtac
agcacctgtctgttttaa
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integrated database retrieval system