Salvelinus namaycush (lake trout): 120066398
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Entry
120066398 CDS
T07522
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120066398 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120066398 (fanci)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
120066398 (fanci)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
YGL041W_C
MIF
Motif
Other DBs
NCBI-GeneID:
120066398
NCBI-ProteinID:
XP_038873669
UniProt:
A0A8U1FDI1
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Position
21:complement(43817147..43837997)
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AA seq
1332 aa
AA seq
DB search
MRADIMEKIVSLSDGERIPELQQYLSSLTDDQLTTVVTNSALKGKDIGAMVKSIFKGSPP
SAPEGASRRLLLYQHCIPLCESGDLQTEVASDIIGLLMLETHNLPGPSLAQLASLFVDAI
KLGKMGSGKSLELFPTVLTALAATEALSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHL
TTMFRDVPLAPEELQFLVEKVLRMFLKLDLQEIPPLVYQLLLLAAKGCKKQVLEGIISYF
KEQDLRQKEEQKDGESMDVEVQSVPQDQLRHVEGTAILHIVFAVRLDQELGREFLKSVKG
SQGELCPFSIALLLSVARIQRYEEQLFDFLKGAITKGFKDEQLQQGSKFLQDLLPQRCSL
AQMILDTVKNSVFGWDHVTQGLVQLGFILMDAFGPKAGPFGKTATEGANATAKTPIQQAC
RLGGQVLLEGFKMHEPIRGEILEQVLNRLVTKTASPVTHFIDLLSDIVVSAPMILLESSS
KVTETFDHLSYLPLATVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSQLDGRKSAVTG
FLLLLKNFRVLGSMGSSQASQAISSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQA
DVRLMLYEGFHDVLRRNSQLASSIMQTLLSQVRRYYEPEQDLLPPVKLELCIGAQGDQVF
LQEPLAHLLSCTVHCLLWYQGMRRSARPNAGGSDDDDDDEEEGGFQDELQSILESITRRM
IKCELEDFELDKSAEFSLSSVGVKNSIYAVLVMGVYEVLIEYNFTKANYSKSLFEELLEL
FSRYNKLSEILKEKSGKGKSSKSPRSLLSMGFVSTLLTALFRDSAQSREEALLVLRSSGD
FLRYAVSVALQKITQLEETGHTDGPDGQNTDKTFHHLCDITSVLMWRYTNIPCAVEDAGK
KEKRCSVSLLCLEGLLRIFSTGQQRYPARVAQLLSAIDVSVEEGSDHGPGNASVTEKTAF
YIRQFQRSLFTQLSGGEEDFNSKEAQLLVNILSVLSRQLEPSSQQFVQMITWTVKICKET
SFEDVAFSKGLLSLLFSLHVLYKSPVSLLWELCQDIHSQLGDIDQDLEVEKQSHFAIVNM
KTAAPTTLLVLSQVGKVLDEVDWLITKKKGQLVPDRLSSGDATQAAGQQDPVEKALTLQL
GTLLTALNELVQTALPSGVCTNTLLGELSRTYTILTNLVKYYIQLCSGQQGLLPARVEKL
VKLSGSHLTPQCYSFITYVQSGELAGGSADDKKKKKKEGEATATASAKLLRETKAIPNLI
YSIEQYEKYLITLSKKSKVNLMQYMKLSTSRDFRINAATLEAALQEHDNSQQTIASQEPE
QSQEPKKKRKKQ
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgacataatggagaagatagtttcgttgtctgatggagagcgcatcccagag
ctgcagcagtacctctcatccctgactgatgaccagctgaccactgtggtaacaaacagt
gcgttgaaggggaaggacattggagccatggtcaaatccatattcaaaggctctccgccc
agtgccccagagggggcgagtcgcaggctgctcctgtaccagcactgcatccccctgtgt
gagtctggagatctccagacagaggtggcatcagacatcattggactgctcatgctagag
acccacaacctgcccggcccctccctggcacagcttgcgtctcttttcgttgatgccatt
aagttgggtaagatgggcagtggcaaatccctggagctcttccccacagtcctcactgcc
ctggctgccactgaggctctatcctatggcaaaggtgagctcagtggggaagagtacaag
aagcagctcatcaacagcctctgctccagcagatgggacccacagtgtgtgatccacttg
accactatgttcagggatgtgcccttggccccagaggagctgcagttcctggtcgagaag
gtcctgaggatgttcctcaaactagacctgcaggagatcccacctttggtctaccagctg
ctgctgctggctgctaagggctgtaagaaacaggtcctggaaggaatcatcagctacttt
aaagagcaggatcttcgccagaaagaggaacagaaagatggagagagtatggacgtggag
gttcagtctgttcctcaggaccagctgaggcatgtggagggcacagccatcctgcacata
gtttttgcagtgcggcttgaccaggagctggggagggagttcctgaaaagtgttaagggg
tcccagggggagctctgtccgttcagcattgctctgctgctctcggtggccaggattcaa
cgctacgaggagcagttgtttgatttcttgaagggggcgatcactaagggcttcaaggat
gagcagctgcagcagggctccaagttcctgcaggacctgctgcctcagcgctgcagcctt
gctcagatgatcctggacactgtcaagaacagtgtgtttggctgggaccatgtgacccag
gggctggtccaactgggcttcatcctcatggacgcctttggccccaaggcagggccgttc
gggaagactgcaaccgaaggggccaacgccacagccaaaacacccatacagcaggcctgt
cggctggggggacaggtactcttggagggcttcaagatgcatgagccaatcaggggtgag
attctggagcaagtcctgaaccgattggtcaccaaaacggcctcccctgtcactcatttc
atagatctcctctcggacattgtggtctcggctcccatgatccttctggagtcatcatcc
aaggtgacagagacgtttgatcacttgtcctacctgccactggccaccgtgcaggggcta
ctcaaggctgtccagcctctgctgaaggtcagtatgtccatgaaggatgctctgattctc
gttctgaggaaggccatgttctccagccagttggatgggaggaagtctgcggtgacgggc
ttcctgctgctgctgaagaacttccgggtcctgggtagcatgggttccagccaagccagc
caggccatctcctccagccaggtccaggtggatgttcactcccgctacaactctgctgcc
aacgaggccttctgcctggagatcctcagcagcctgcgccgatgtctgggccagcaggcc
gatgtacgactcatgctctacgagggtttccatgatgtcctccgccgcaactctcaacta
gcaagctccatcatgcagaccctgctctcgcaggtgaggcggtactatgagccagaacag
gaccttctgcccccagtgaagctggagttatgcatcggtgctcaaggagaccaagtcttc
ctccaggagcctctggcccatctgttgagttgcacagtccactgcctgctctggtaccag
ggcatgcgccgttcagcccggcccaacgcaggcgggagtgacgatgacgatgatgatgaa
gaggaagggggatttcaggacgagctgcagagcatcctggagagcatcacgcgccggatg
atcaagtgtgaattggaggactttgagctggataagtcggctgagttctccctgtccagt
gtgggggtgaagaacagcatctacgccgtgctggtgatgggagtgtacgaggtgctcatc
gaatacaacttcaccaaggccaactacagtaagagtcttttcgaggaactcctggagctg
tttagtcgctataacaagctgtctgagatcctgaaggagaagtctggaaagggcaagagc
agcaagagccctcgaagcctgctgtctatgggctttgtgtcaacactgctcactgcactc
ttcagagacagcgctcagagcagagaggaggctctgttggtgctgcgctctagtggggac
ttcctgcgttacgctgtgagcgtggctctgcaaaagattacacagttggaggaaactgga
cacactgacggccccgacggacagaacacagacaagaccttccaccacctctgtgacatc
actagtgtcttgatgtggcggtacaccaacatcccgtgtgcagtggaggatgctgggaag
aaggagaagcgttgcagtgtgtccctgctgtgtctggagggcttgctgaggatcttcagc
accgggcagcagcgctacccagccagggtggcccagctcctttctgccatcgatgtctct
gtggaggaagggagtgatcacgggccagggaatgccagtgtcacggagaagactgctttc
tacattcgccagttccagaggtcactgtttacccagctgagtggaggggaggaggacttc
aacagcaaggaggctcagctcctggtaaacatcctgagtgtgctctcacgccagctagaa
ccctcctcccagcagtttgttcaaatgatcacctggacagtgaaaatctgcaaggagacc
agctttgaggacgtagcgttcagtaaaggcctgctctccctgctcttcagtctgcacgtg
ctctacaagagtcccgtcagtctgttgtgggagctttgtcaagacatacacagtcagctg
ggagacatcgaccaggatttggaagtggagaagcagtctcactttgccatcgtcaacatg
aagaccgctgcgccgacaacactcctggtgctgtctcaggtggggaaagtattggatgag
gtggactggctgatcaccaagaagaaaggccagttggtccctgacaggctcagctctggt
gatgccacccaggctgcaggccagcaggacccagtggagaaggcgctgacgctgcagctg
gggactctcctgacggccctgaacgagctggtccagaccgctctgccatctggagtctgc
accaacacactgctgggagagctgagccgtacatacaccatcctcaccaatctggtcaaa
tattatatccaactgtgctcaggccaacagggcctgctcccagcacgcgtggagaagctg
gtcaagctgtccggctctcacctgactccacagtgctactccttcatcacctacgtgcag
agtggtgagctggccggtggaagtgcagatgataaaaagaagaagaaaaaggagggggag
gccacagctacagcatcagccaaactcctacgtgagaccaaggccattcccaacctgatc
tacagtatagaacagtacgagaaatacctcatcaccctctccaagaaatcaaaggtgaac
ctgatgcagtacatgaaactgagcacgtccagagatttccgcatcaacgcagccactctg
gaggcagcgctgcaggagcacgacaacagtcagcaaaccatagcctcccaggagccagag
cagagccaggagcccaagaagaagaggaagaagcagtaa
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