Salvelinus namaycush (lake trout): 120066479
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Entry
120066479 CDS
T07522
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120066479
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120066479
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
120066479
NCBI-ProteinID:
XP_038873807
UniProt:
A0A8U1FBY1
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Position
Sna21:52116384..52127645
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AA seq
613 aa
AA seq
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MEESEVVELSVEDKPKSRRISSKRTSTISLAVVSSETSPATVNNSKKPPLCRGSSFTFLT
PGTPWDFSLKRKNKESKDDDTVSLSSFDLKKRKRKEKKEDEDTVSLSSFDLKEPSNKRVR
PLSRVSSLANLISPSKNGAVRRFGQTIQNMSLRGDSKSPGASLKSCSKAAGPTPPKRRNS
TLWSETLDVHQKSTFSTKEIKRQEAIHELSRGEQDLIEDLQMARKAYHDPMLKLSIMTEE
ELTHIFGDLDSYIPLHEDLLDKLAKGTGPNGTVGQIGQIVVDWLPGLNAYKDYCSNQLAA
KALLDQKKQDRRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLREILRHTPPDH
PDVPCLEKAVAIIQGVLSDINMRKGESESQYYINKLEYLDDRQKDPLIDNCKILLCHGEL
RNKSGSKLHVFLFSELLVLTRPVTRNERSCYQVYRQPLPIRDLALEDLQDGDVRMGGSFR
GAFSQGEKAKNVFRVTSLDPTHGQSHTLQVNDVFHKQQWLNCLRSAIDAQPRQQRAPLRD
QHSEATTMTRAKRRSSVVSMSDMVGADENVCSQVGEAILGCKGTETLPRSGSSSKIKREW
SRGTHRRRKETGV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcagaggtggtcgaattatctgtggaagacaagccgaagagtcgaaggatt
tcctcgaagagaacgtccaccatcagcctagccgtcgtcagctcagaaacctcccccgcc
actgtcaacaactctaaaaaacctccactgtgcagagggagttccttcacctttctgact
ccaggaacaccatgggacttcagcctgaagaggaaaaataaagagtccaaggatgatgac
actgtcagtctgtccagctttgacctcaaaaagagaaaacgcaaagagaaaaaggaggat
gaagacaccgtcagtctgtccagttttgacctcaaagagcccagtaacaagcgtgtgcgg
ccactgagtcgggtgtcatctctggctaacctgatctccccttccaagaatggagctgtc
cgacgctttggtcaaaccatccagaacatgtcactgcggggtgacagcaagtcgccgggt
gcgtccctgaagtcgtgcagtaaggcagcaggcccaacacctcccaaacgcagaaacagc
actctgtggtctgaaacactggacgttcaccagaagagcaccttctccaccaaagagatt
aagagacaggaggccattcatgagctatccagaggagaacaggaccttattgaagacctc
caaatggcacgaaaggcatatcacgatcccatgctgaagctctccatcatgacagaggag
gagctaactcatatatttggagatctggattcttacattccacttcatgaagacttgttg
gataagcttgcaaagggcaccggacctaatggaacagttggtcagattggacagatcgtt
gtggactggttgccaggtttgaatgcttacaaagactattgcagtaaccagctggctgcc
aaggccctgttggaccagaagaagcaggaccggagggttcaggacttcctgcagcgctgc
ctggagtctcccttcagtaggaagctggacctgtggagcttcctggatatacccaggagc
cggctggtcaaataccccctactgctgagagagatactgaggcatacaccaccagatcac
cctgatgtaccctgtctggagaaagcggtggccatcatccagggtgtgttgtctgacatc
aacatgaggaagggagagtcagagagtcagtactacattaataagctggagtatctggat
gacaggcagaaagacccgctcatcgacaactgcaagatcttgctgtgtcatggagagcta
cgcaacaagagtggctcgaaactgcatgtgttcctgttctctgagctgctggtgctgacg
aggccggtgacgcgtaatgagcggagctgctaccaggtgtaccgtcagcccctccccatc
agagacctggctctggaggacctgcaggatggagacgtacgcatgggagggtcattcaga
ggggctttcagccagggggagaaagctaagaacgtgttccgcgtgacctccctggacccg
acccacggccagtctcacaccctgcaggtcaacgacgtcttccacaagcagcagtggctc
aactgtctccgcagcgccatcgacgcccaacctcgacagcagagggcgccactcagagat
cagcacagtgaggctacaaccatgaccagggccaagcgtcgttcttctgtggtgtccatg
tctgatatggtgggggcagatgagaacgtctgctcccaggtcggtgaggcaatcctaggg
tgtaaaggcacagagacactccccaggtctggttcttcaagtaaaatcaaaagagagtgg
agccgtggtacgcatcgcaggaggaaagagaccggggtttag
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