Salvelinus namaycush (lake trout): 120066491
Help
Entry
120066491 CDS
T07522
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1-A-like isoform X1
KO
K08543
testicular receptor 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066491
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120066491
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120066491
Nuclear receptors [BR:
snh03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
120066491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
120066491
NCBI-ProteinID:
XP_038873826
UniProt:
A0A8U1H7X8
LinkDB
All DBs
Position
Sna21:52758968..52782237
Genome browser
AA seq
624 aa
AA seq
DB search
MDGHTQRIQLVSADGGMMGHRIQIVTDQATGQKIQIVTALEQGSGGKQQFILANADYSTP
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLSGQQIQFVTEGSDQALAKPVVEYC
VVCGDRASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MVLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSASLLESSMLLNIQQPFPKLENSILVPTSPESNDPCQDDLSTLANVVTSLAHLNK
AREMNDGTDSNDLMGAEDTLSNGDSSMTDLQGDEQTACDITRAFDTLAKALNPGDGSAGD
SLEATMQLMSGDQSGPVVELEGPLLLDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGQDNDINLMKACWNELFALGLAQCSNVMNVSTILAAIINHLQTSLQ
DGTGGDEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDVYEYAYLKAIILFSPDHPGIDNT
LQIERFQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMNAAVTEELFFTGLIGNVQ
IDSIIPYILKMESTDYNSQVGTGV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacggacacactcagaggattcagctggtctcagctgacggtggcatgatgggacat
cgtatccagatcgtgacggaccaggcgacgggccagaagatccagatcgtgacggcgttg
gagcagggttctggtggcaagcagcagtttatcctggctaatgcagactactctacgcca
ggcaaggtaatcctagccaagcaagaggcctcgtccccgggaaaggtgatcctggcggcc
ccagacggttcaggggtcaaccagctgctgtttgcctcacctgacctgtccggccagcag
atccagtttgtgacagaagggtcagaccaggcacttgccaagcctgtggtggagtactgt
gtggtgtgtggagacagggcctcaggccgtcactacggggcagtgagctgtgagggctgt
aagggcttcttcaagcgcagcatcaggaagaacctggtttatacatgccgggggtctgga
gaatgtgtcatcaacaagcaccataggaaccgctgccagtactgcagactgcagcgctgc
atggtcctgggcatgaaacaggactctgtccagtgtgagaggaagccggtggaggtctcc
agagagaagtctatcaactgtgctgcatctacagagaagatctacattaggaagaacctg
tgtagtcccctggctgccacgcccaccttcgtcactgacaaggagaccgccaggtactac
aaggagacagccaggtcagccagtttgctggagtcgagcatgctcctgaacatccagcag
ccttttcccaagctagagaacagcatcctggtccccacatcccctgaatcgaatgacccg
tgtcaggacgacctgagcacgctggccaacgtggtgacgtcactggcccacctgaacaag
gcccgggagatgaacgatggtaccgacagcaatgacctgatgggcgcggaagacaccctt
agcaatggagacagctccatgacggatctccaaggagacgaacagactgcctgtgacatc
acccgagcgtttgacactctggccaaggccctgaaccctggggacggctcagcaggagac
tctctggaagccaccatgcagctgatgtcaggagaccagtctggccccgtggtggagctg
gaggggcctctactcttagacagccacgtccccttcaagctgatgatgccgttgcccatg
ccggagtaccttaatgtgaactacatctgtgagtcggcctcgcggctcctcttcctgtcc
atgcactgggcacgctccatacctgccttccaagccttgggtggtcaggataatgacatt
aacctgatgaaggcgtgttggaacgagctgtttgctctgggcctggctcaatgctccaat
gtcatgaatgtctccaccatcctggctgccatcatcaaccaccttcagaccagcctacaa
gatggtacaggaggtgatgagaagctgtccccagagagagtgaagctggtgatggaacac
atctggaggatgcaggagttctgtaacagcatggccaagctgtcccctgacgtttatgaa
tacgcctaccttaaagccatcatcctcttcagccctgaccacccaggtatagacaacacc
ctacagattgagcgtttccaggagaaagcctacatggagctacaggattatgtaactcgg
acctaccctgaagactcatatcggttatccaagctgctgcttcgtcttcctgccctgcgg
cttatgaatgcagcggtgacagaggagctgttctttactggcctcatcggcaacgtacag
atagacagcatcatcccttacatcctcaagatggagtccactgactacaacagccaggtg
ggcactggcgtctga
DBGET
integrated database retrieval system
