Salvelinus namaycush (lake trout): 120066556
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Entry
120066556 CDS
T07522
Symbol
cpeb1a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1a
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04114
Oocyte meiosis
snh04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120066556 (cpeb1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
120066556 (cpeb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120066556 (cpeb1a)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120066556 (cpeb1a)
Factors involved in mRNA localization
Trans-acting binding proteins
120066556 (cpeb1a)
mRNA cycle factors
P-body specific factors
120066556 (cpeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
120066556
NCBI-ProteinID:
XP_038873909
UniProt:
A0A8U1FDZ6
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Position
Sna21:9713608..9734183
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AA seq
575 aa
AA seq
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MAFSLKEDLRLHDHWHTGSQTLPTCSNGDIFRRINNMLGNSLDLTGVCTTPTNHKGERVH
HLSDLLDGDFAPMGSPIGSKVPCPSRAQGSTLRGGGLSDLTQLGLGLQSLSLACWEQPSA
AMEPPSHTNSPSMLGMLGSPLGQPLEPLGTTDLLAMFPGLSHGGNPRVEGRAFLDSRCNS
PADSETSGFSSGSDHLSELLSSLRISPPLPFMMPGVQQRDPHILGTAVGCSRLALHDDNS
ALSPEPPTLPGQGRCGVPLAKRFPQASVWPSWDLLEDPQKPFNIEREARLHRQAAAVNDA
TFTWSGQLPPRNYKNQVYSCKVFLGGVPWDVTEASLVGTFSMYGPLSVEWPGKDGRHPRC
PPKGMVSAGYVYLVFESERSVHGLLQACTQDLLHKDDYREYYYKMSSRRMRCKDVQVIPW
VLVDSNFVRCPSQRLVPSKTVFVGALHGMLNAEALAFIMNNLFGGVMYSGIDTDKHKYPI
GSGRVTFNNQRSYLKAVSAAFVEIKTPKFTKKVQIDPYLEDSTCQVCNRQPGPFFCRDLA
CYKYFCRSCWHWQHSMDVLRSHRPLMRNQKRLDCS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggccttttctctgaaagaagacctgaggctccatgaccactggcatacaggctctcaa
accctgcctacatgcagcaatggtgatatcttccgccgaattaacaatatgttgggcaac
tctctggacctcactggggtgtgcactacacccacaaaccacaagggggagcgtgtccat
cacctgtcagacttactagatggtgattttgctccgatgggtagccctataggcagcaag
gttccttgcccctccagagcccagggctctacgctccgtggtggtggcctgtctgacctc
actcagctgggcctggggctgcagtcgctcagcctagcctgctgggagcagccctccgct
gccatggagcctccgtcgcacaccaactcgccctccatgctaggcatgctgggtagccca
ttgggccagcctctggaacctctgggcaccacagatctgctggcgatgttccctgggctg
agtcatggtgggaatccccgcgtggaggggcgcgccttcctggactcgcgctgcaacagc
ccggccgactctgaaaccagtggttttagctccggatcggaccacctctctgagctgctg
tcttctctgcggatctctccgcccctgcccttcatgatgccgggggtacaacagagggac
ccccacattctaggcacagccgttggctgttctcgcctggccctccacgacgacaactcc
gctctcagccctgagccccccaccctaccgggccagggccgctgtggggtgcccctggcc
aagcgctttccccaggcctcagtgtggcccagctgggacttgctggaggatccccaaaag
cccttcaacatcgagagggaggctcgcctgcacagacaggctgcagctgtgaacgatgcc
accttcacatggagtggccagctgcctcccaggaactacaagaaccaagtgtactcatgt
aaagtgttcctgggcggtgtgccatgggatgtgactgaagccagcctggtcggcacgttc
agcatgtacggacctctgagtgtggagtggccgggtaaggatgggaggcacccacgctgc
ccacccaaaggtatggtctctgcaggctatgtgtatctggtgtttgagagtgagcggtct
gtccatgggctgctgcaggcttgcacccaggacctgctccacaaggatgactatagggag
tattactacaagatgtctagccgaaggatgcgctgcaaggacgtgcaggtaatcccttgg
gtgctggttgacagtaactttgtgcgctgcccgtcccagcggctggtccccagtaagact
gtgtttgtaggagcgctgcatggcatgctcaacgcagaggccctggccttcatcatgaac
aacctcttcggaggggtcatgtactctggcatcgacacggacaaacacaagtaccctata
gggtcgggacgtgtgaccttcaacaaccagaggagctacctgaaggctgtgagcgccgcc
tttgtggagatcaagactccaaagttcaccaaaaaggttcagatcgacccctacttggag
gactccacgtgccaagtgtgtaaccgacaaccagggcccttcttctgcagagacctggcc
tgctacaagtacttctgccgctcttgctggcactggcagcactccatggacgtgctccgc
agccacaggcctctcatgaggaaccagaagcgcttggactgtagctaa
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