KEGG   Salvelinus namaycush (lake trout): 120066667
Entry
120066667         CDS       T07522                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120066667 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120066667 (exosc6)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120066667 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 120066667
NCBI-ProteinID: XP_038874031
UniProt: A0A8U1FCG9
LinkDB
Position
Sna21:25209041..25210574
AA seq 274 aa
MPTDTKRVRGPEVSQSPSLFLCKTAVKKSNDARVDGRQRGQVDVRSVFVRCGLISQAKGS
AYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEKDLS
LMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLVLGC
SIRQEGATYLIDPTFLEENGCNLTSGSRENLGSLTVAFLPSLNQISGLQSDGEMGEDTLT
GGVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaccgcggtaaagaagtccaacgacgccagggtagatggcaggcagcgtggt
caagtggatgtccgttcagtttttgtccgatgtgggctgataagtcaagccaaaggttca
gcttacattgaagctgggaacacgaagctcatatgctgtgtgtatggacccagagagact
gagcgcaaggatgagaccgatatgaaatccggaagactgattactgacatgagatttgcc
ccattctcttgtcgagagagaggctcgtggattcaaggtagtgatgaaaaggatctgtca
ctgatgctgttggaaagcctgaggccaggagtgtgcttgcagaagtatcctcgctctcag
attgaagtaaatgtgatggttcttgaaaacgacggcgccgtcctggcacatgcagtcacc
tgtgcgtccatggcgctggcggacgcaggtatagagatgtacgatctggttcttggatgc
tcaatccgtcaggaaggtgccacataccttatcgaccctacctttctggaggaaaatgga
tgcaacttgacctcaggatccagggagaatttgggaagcctgacagttgcatttctcccc
agtctgaaccagatttctggactacaatcggatggcgagatgggcgaggacacccttact
gggggtgtgcgcacatgtattgaggggtgtttcaaactctaccctgtcattcagcaagca
ctgtccaaggcagtacgaagaaaagcaccaccatcagagagctga

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