Salvelinus namaycush (lake trout): 120066667
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Entry
120066667 CDS
T07522
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120066667 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120066667 (exosc6)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120066667 (exosc6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120066667
NCBI-ProteinID:
XP_038874031
UniProt:
A0A8U1FCG9
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Position
Sna21:25209041..25210574
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AA seq
274 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKTAVKKSNDARVDGRQRGQVDVRSVFVRCGLISQAKGS
AYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEKDLS
LMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLVLGC
SIRQEGATYLIDPTFLEENGCNLTSGSRENLGSLTVAFLPSLNQISGLQSDGEMGEDTLT
GGVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaccgcggtaaagaagtccaacgacgccagggtagatggcaggcagcgtggt
caagtggatgtccgttcagtttttgtccgatgtgggctgataagtcaagccaaaggttca
gcttacattgaagctgggaacacgaagctcatatgctgtgtgtatggacccagagagact
gagcgcaaggatgagaccgatatgaaatccggaagactgattactgacatgagatttgcc
ccattctcttgtcgagagagaggctcgtggattcaaggtagtgatgaaaaggatctgtca
ctgatgctgttggaaagcctgaggccaggagtgtgcttgcagaagtatcctcgctctcag
attgaagtaaatgtgatggttcttgaaaacgacggcgccgtcctggcacatgcagtcacc
tgtgcgtccatggcgctggcggacgcaggtatagagatgtacgatctggttcttggatgc
tcaatccgtcaggaaggtgccacataccttatcgaccctacctttctggaggaaaatgga
tgcaacttgacctcaggatccagggagaatttgggaagcctgacagttgcatttctcccc
agtctgaaccagatttctggactacaatcggatggcgagatgggcgaggacacccttact
gggggtgtgcgcacatgtattgaggggtgtttcaaactctaccctgtcattcagcaagca
ctgtccaaggcagtacgaagaaaagcaccaccatcagagagctga
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