Salvelinus namaycush (lake trout): 120066706
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Entry
120066706 CDS
T07522
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066706
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120066706
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GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
120066706
NCBI-ProteinID:
XP_038874086
UniProt:
A0A8U1FDA7
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Position
Sna21:34376932..34391250
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AA seq
460 aa
AA seq
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MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGAD
GMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGEDSDET
QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSN
RRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPVSFSSGSMLGRPDTA
LTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPPHMQAHMN
SQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccttcaatcttcgcctgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgtg
tcgtcgataaacagagtactgcgcaacctggctagcgagaagcaacagatgggcgcagat
ggcatgtatgagaagttgagaatgctgaacggtcagactgggacgtgggggacccggccg
ggctggtaccccggaacctcagtgccaggacagcccaacccagatggttgtccacagtca
gacggtggaggtgagaacactaattcaataagttcaaatggagaagactcggatgagacc
caaatgagacttcagctcaaaagaaaactgcaaaggaaccgcacttcgttcacacaagaa
cagatagaagcgcttgagaaagagtttgaaagaactcactatccagatgttttcgcaagg
gaaagacttgctgcaaaaattgacctcccagaggccagaatacaggtgtggttttcaaat
aggagggcaaagtggaggagggaggagaaactccggaatcaaaggcgacaagccagtaac
tcctccagtcacatccctatcagcagcagtttcagcaccagtgtctaccagcccatccca
cagaccacagcaccagtgtcgttctcgtcaggatccatgttgggaagaccagacacagcc
cttacaaacacatacagtgccctgccacctatgccaagcttcaccatggccaacaacctg
cctatgcaagcccctgtgtccagccagacctcctactcctgcatgctgcccaccagtccc
tcagtcaacggacggagctacgacacgtacacccctcctcatatgcaggcacatatgaac
agccaatcaatggctggttcaggtggcaactcaacaggtctcatctctcctggagtatct
gttcctgttcaagtcccaggcagtgaagcagacatgtcccagtactggcccaggctacag
tag
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