Salvelinus namaycush (lake trout): 120066756
Help
Entry
120066756 CDS
T07522
Name
(RefSeq) transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066756
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
RF-X
120066756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Clr5
Motif
Other DBs
NCBI-GeneID:
120066756
NCBI-ProteinID:
XP_038874153
UniProt:
A0A8U1FE14
LinkDB
All DBs
Position
21:complement(45376916..45410136)
Genome browser
AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVIKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTWEEHRRLIINLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKAEGSTAEQEEEMMLTETTPTSTSPGPFSPPKSVTSVGVPAASSPTAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPPEGGQQQPCMRSGAPVPPPSSTHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGAPRLHPTPVAPRWADVSPANSCYTSPPMHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagagcgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcttctaaaccccattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctatatgcactacctggacttttgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactgaccacaagaagactgggc
accaggggccagtcaaagtaccactactatggtatcgctgtgaaggagagctcccagtac
tacgatgtgatgtactccaagaagggggcggcgtgggtgaacgagacaggcaagaaggag
gtcatcaagcagacagtggcgtattcaccacgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggacacagtaatacgcgccaac
tttgatgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctgggctcctccactgtggtcaacatcgtgggcgtctgtgactccattctttac
aaggccatctctggggttcttatgcccaccgtcctgcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaaatttgaattatctagaagattttctcaagttctc
aagaggcagacatctttgaaccatctatgtcaggcgtcacggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggcggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacatgggaggagcaccggcggctcatcatcaacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagaggcctacatcgagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcaggaaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgcttcgggacccgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgttgtacctgctggagtccctgcactgccaggagagggccaacgagctc
atgagggccatgaaggcagagggcagcacagctgaacaagaggaagagatgatgctgaca
gagaccacgcccacctccacgtccccagggccattttccccaccgaagtctgtcacctca
gttggggttccagccgcaagctctcccaccgctgcccagtccccagagtacacaggggcc
acagccaccacaggcgctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcactcctcccgagggcggacagcagcagccctgcatgcgcagcggtgcaccc
gtgccccctccctcctccacccatcgactgccagtctacgcccacagggacgagcacggg
tttactgggagctataactacgggagctactctaaccagcacccccactccatccagagc
cagtaccccagtctggcccacgaaccaggcatccctgcccccctccactatcccgcctac
caccgcacctctgcacagtacccgctcaatagccagatgtctcggatggagccatgcttg
atgggaggtgctcctcggctgcaccctacgcccgtggccccacggtgggcggatgtctcc
ccagccaacagctgttacaccagtccccctatgcactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtacgaacactcacaacacttt
cccggcttcgcttacatcaatggagaggccaccacaggctgggccaagtag
DBGET
integrated database retrieval system
