Salvelinus namaycush (lake trout): 120066899
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Entry
120066899 CDS
T07522
Name
(RefSeq) ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120066899
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120066899
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Lpg0393_VPS9
SH2
RA_2
RelB
Motif
Other DBs
NCBI-GeneID:
120066899
NCBI-ProteinID:
XP_038874212
UniProt:
A0A8U1FCN3
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Position
Sna2:69827099..69873862
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AA seq
1042 aa
AA seq
DB search
MAATLPSTLHSTLPRPDCHMDRSWSFFKVSDGLTDSDLSMSATLPRPDCHTDRRGSFFKL
IDTFALEIGELKQEMVQTSPIEDRDPYPMVLQGLEGEVSGVYLQSSPCAGASGERDSGYD
SLRRRMSVLDRLRHTHPVWLLLTLSDTEATRILLQQPPGVFLVRKSCTLQRKVLSLRVRD
DDASGGASICDFPVRESQYTFSLEGSGISFADLFRLVAFYCISRDVLPFTLNLPEAIAAS
KTQKDLEEVAQLGAGFWHSALGSLRRTTSPSRPPPQRPDRDGDNQGAERTQEKQSVTRHS
SIPPALPPSSSSSRLERSQSNGALCFVNPLFLQTHRRLEEDPPSSSSSPSPYVTHSTPSP
GTTGGTSSAPVTDPNVNRKSRPPRPPPPHSLLFPPPRSLSQRRQAPPPPTPLSQKPKSSM
PETPAAIVVTRQPLQPSSNQNLRPTPRPPMGARHSSHSKKMTSSTAIPVPHHHPQHPPPP
HSKKPDIDAHRCHIALDDETIAKALSRAKLPSCQAPAIPAPSIVGNGAGSPPSPPGKTPR
REGQEGRLSDMSISTSSSDSLDYSHPPLSLPASPPLRLRHHLGNNKDSSDDEDLCDEEEE
DYGVSLENDLDQGLRPPFKAHRRGVGVGVKVALSFRKVSGVFSTFMTPERRAVRRIAELS
RDKSSYFGCLVQDYISFVQENKGCHTSGLDLLQTLRQFMTQMKAYLTQSSELDPPIESLI
PEDQIDTVLEKAMHKCVLKPLKGVVEVALHDFQVSSGGWQQLRENLALAKTRRPQDLGVD
GAVPPDPMAIEKIRHKFHNMRKMYSPDKKVSLLLRVCKLIYTIMQDNSGRMYGADDFLPM
LTYVLAQCDMPQLDTEILYMMELLDPSLLHGEGGYYLTSAYGAMALIKNFQEEQAARVLS
SEARDTLHQWHRRRTAQRTAPSVDDFQNYLRVALQEVNSGCTAKTLLVHPYSTTEEVCSL
CAYKFKVHDPENHALFLITEATSQQLAPDTHPQRIKAEIHSHPNSQPFHFVYRRVPNLNL
CIPAIPANQHNGNCLLPSQLDE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacgctgccatctacactgcactctacgctgcccagaccagactgtcatatg
gacaggagctggagtttctttaaggtctcagatggactcacagactcagacctaagcatg
tctgctacgctgcccagaccagactgtcatacggacaggagaggaagcttctttaagctg
atagacacgtttgcgttggagataggggagctgaagcaagagatggtccagacctcccca
atagaggacagagacccataccctatggttctacaggggttggagggggaggtgagcggg
gtttacctccagtcctcgccctgcgctggcgccagtggtgaaagggattctgggtacgac
tccctgcgtaggaggatgagcgtgctggacagactgaggcatacgcaccctgtgtggcta
ctgctcacgctcagtgacacggaggccacacgtatactgctgcagcagcctccaggggta
ttcctggtgaggaagtcatgcactcttcagaggaaagttctgtctctaagggtcagggat
gatgacgcctctggaggagccagcatctgtgactttcctgtcagagagagtcagtacacc
ttttctctggaaggatctgggatcagttttgcagacctgtttcgcctggtggccttctac
tgtatcagcagggacgtccttcccttcaccctgaatctcccagaagccattgcagcttcc
aagactcagaaagacctggaggaggtggcccaactaggagcaggattctggcactctgct
ctaggcagcctgcgaaggacaacctctccctctcgccctccaccacagcgccctgacaga
gacggtgacaaccagggtgcagagaggacacaagagaaacagagtgtgactcgccacagc
agcattcctccagctcttcccccttcctcctcctcctctcgcctggagagaagccagtcc
aacggggctctttgcttcgtcaaccccctcttcctccagactcaccggcggcttgaggaa
gaccctccatcctcatcctcctctccttccccctacgtcacacactccacccccagccca
ggaactaccggtgggacgtcttcggcccctgtcacggaccccaacgtgaacaggaagtca
cgcccacctcggcccccgcctccccattccctcttattcccgcccccccgttccctctcc
cagcgccgccaagctccccctccccccacccctctatcccagaagcccaagagcagcatg
cccgaaacacctgcagccattgttgtcaccaggcaaccactgcagccttcatccaatcag
aaccttcgccccacccctcgccctcccatgggtgccaggcacagcagccattccaaaaag
atgacgagcagcaccgccatccctgtgccccaccatcaccctcaacaccctcctccccca
cactccaaaaaacctgacatcgacgcccaccggtgccacatcgctcttgatgacgagact
atcgccaaggctctgtcccgtgccaagcttccctcgtgccaggcaccggccatacccgct
ccctccatagtgggaaatggtgctggtagcccccccagccctccgggtaagacccccagg
cgagagggacaagaggggaggctgagcgacatgtcaatctccacctcttcctcagattct
ctggactactcccaccctcccctctccctccccgccagcccccctcttagattacggcat
caccttggcaacaacaaggacagcagcgacgacgaagacctctgtgacgaagaagaggaa
gactacggcgtcagcctggagaacgacctggaccagggcctccgtcctcccttcaaagcc
caccggagaggggtcggagtcggggtcaaagttgcgctgagcttccgaaaagtttctgga
gtcttcagcacgttcatgaccccagaaaggcgagccgtgaggaggatagcagagctctcc
agggacaagagttcctactttggatgcctggttcaggattatatcagttttgtacaggag
aataaggggtgtcatacgtcaggcttagacctcctgcagaccctcagacagttcatgacc
cagatgaaggcctacctgacgcagagctccgaactggacccacccatcgaatcactcata
cccgaggatcagatagacactgtcctggagaaggccatgcacaaatgtgtgttgaagccg
ctgaagggcgtagtggaggtggccctgcacgacttccaggtgagcagtggaggctggcag
cagctgagggagaacctggccctggctaagacccggaggccccaggacctgggtgtggac
ggggccgtgccccctgaccccatggccatcgagaagatccgccacaagttccacaacatg
aggaagatgtactccccggataagaaggtgtcgctgctgctccgagtgtgtaaactcatc
tacaccatcatgcaggataactcagggaggatgtacggagcagatgacttcctaccgatg
ctgacctatgtcctggcccagtgtgacatgcctcagctggacactgagatcctctacatg
atggagctgctggacccctcactgctgcatggagagggtggctactacctgaccagtgcg
tacggggccatggctctcatcaagaacttccaggaggaacaggcagccagggtcctcagc
tccgaggccagagacaccctgcaccagtggcaccgccgacgcaccgcccagcgcacggca
ccctccgtggacgacttccagaactacctgcgagtcgccttacaagaagtcaacagtggc
tgcacagccaaaaccctcctagtccacccgtactccaccaccgaagaagtatgctcgctc
tgcgcctacaagttcaaagttcatgaccccgagaaccacgccctctttctcatcactgag
gcaaccagtcagcagcttgccccggacacacacccccagcgaatcaaagcagagatacac
agccacccaaactcgcaacccttccattttgtctaccgcagagtgcccaaccttaacctg
tgtataccagctatcccagctaaccagcacaatggcaactgcctactgcctagccaattg
gatgaatga
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