Salvelinus namaycush (lake trout): 120066959
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Entry
120066959 CDS
T07522
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120066959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120066959
03036 Chromosome and associated proteins [BR:
snh03036
]
120066959
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120066959
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120066959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_Aladin
Beta-prop_EML_2
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
PilN
Motif
Other DBs
NCBI-GeneID:
120066959
NCBI-ProteinID:
XP_038874225
UniProt:
A0A8U1FE03
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All DBs
Position
Sna22:21981609..21982637
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AA seq
342 aa
AA seq
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MSLHCKQKEIYKHEPPWTVYAMNWCVRPDKRFRLALGGYVEEYNNKMQIVGLEEESLEFI
CRNTFDHLYPTTKIMWIPDSKGVYLDLLATSGDYLHIWGISDTETRLECLLNNNKNSDFC
APFTSFDWNEVDPNLLGTSSIDTICIIGGLETGQVLSKVNLVSRQVKTQLIAHDKEVYGI
AFSHAGGGRDMFASVGADGSVRMFDQRHLEHSAIIYEDPQHHPLLHLCWNKQDPNYLATM
AMDVMEVVILDVHVPCTPVARLNNHWACVNGFAWAPHSSCHICTAAEDHQALIWDIQQMP
RAIKDPILACTAEEEINNVQWASTQPDWIAISYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctccactgtaagcaaaaagagatctacaaacacgaaccgccatggacggtgtat
gcaatgaactggtgcgttcgtcccgacaagcgctttcgcctggcccttggaggttacgtt
gaagaatataacaataagatgcagattgtgggtctggaggaggagagtttagagttcatc
tgcaggaacacctttgaccacctctaccccaccaccaagatcatgtggatcccggacagc
aagggtgtttacctagacctgcttgccactagcggggactacctgcacatttgggggatc
agtgacacagagacgcgtttggaatgcttgctgaataacaacaagaactctgacttctgt
gcaccattcacctcgtttgactggaatgaagtagatcctaatctactgggcacctccagc
attgacaccatctgtattatcggggggttggagactggccaggtactaagcaaagtcaac
ctcgtatctcgccaagtcaagacccagctcattgctcatgacaaagaggtgtatggcata
gcgttcagccacgcaggcggtggtcgggacatgtttgcgtcggtcggagcggacggctca
gtaaggatgtttgaccagcggcacctggagcacagcgccatcatctatgaagacccccag
caccaccccctactgcacctctgctggaacaaacaggaccccaactacctggccaccatg
gctatggacgtcatggaggttgtgattctggacgtgcatgttccctgcacgccggtggcc
cgcctcaacaatcactgggcatgtgtcaacggattcgcctgggctccccactcctcctgt
cacatctgcactgcagctgaagaccaccaggcgctgatatgggacatccagcaaatgccc
agggccatcaaggaccctattctggcctgcacagcagaggaggagatcaacaacgttcag
tgggcctccacccagcctgactggatcgccatcagctacaacaactgcctagagatcctg
cgggtctaa
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integrated database retrieval system
