Streptococcus nidrosiense: AAFQ93_02470
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Entry
AAFQ93_02470 CDS
T10825
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
snid Streptococcus nidrosiense
Pathway
snid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAFQ93_02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snid03021
]
AAFQ93_02470
03400 DNA repair and recombination proteins [BR:
snid03400
]
AAFQ93_02470
Enzymes [BR:
snid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAFQ93_02470
Transcription machinery [BR:
snid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAFQ93_02470
DNA repair and recombination proteins [BR:
snid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAFQ93_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Mg_chelatase_C
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XHB97611
LinkDB
All DBs
Position
495610..496545
Genome browser
AA seq
311 aa
AA seq
DB search
MIEFEKPNITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVKDEKIIELDVQGPAEITAGDILTDSDIEIVN
PDHYLFTIGEGSSLKATMTVNSGRGYVPADENKKDNAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLDLFTNLTEIAKSAEVMKEADT
ESDDRILERTIEELDLSVRSYNCLKRAGINTVHDLTEKSEAEMMKVRNLGRKSLEEVKVK
LIDLGLGLKDK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtttgaaaaaccaaatataacaaaaattgatgaaaataaagattatggcaag
tttgtaatcgaaccgcttgaacgtggttacggtacaacacttggtaactctcttcgtcgt
gtacttctagcttctcttccaggggctgctgtaacatctatcaatatcgaaggtgtattg
catgaatttgatacagttccgggtgttcgcgaagacgtgatgcaaatcattctgaacatc
aaaggtattgcagtaaaatcttacgttaaagacgaaaagatcattgaactagatgtgcaa
ggtcctgctgaaattacagctggagatatcttgacagatagcgacattgaaattgtaaat
ccagatcattatctctttacaatcggtgaaggttcttctctaaaagcgacaatgactgtt
aacagtggtcgtggatatgtacctgctgatgaaaacaaaaaagataatgcaccagttgga
acacttgctgtagattctatttatacaccagttacaaaagtcaactatcaagttgaacct
gctcgtgtaggtagcaatgatggtttcgacaaattaacccttgaaatcttgactaatgga
acaattattccagaagatgctttagggctttcagcacgtatcttgacagagcaccttgat
ttgtttacaaatcttacagagattgctaagtcagcagaagtgatgaaagaagctgatact
gaatcggacgaccgtatcttggaacgtacgattgaggaacttgacttgtctgtgcgttca
tataactgtttgaaacgtgccggtattaacactgtgcatgatttgacagaaaaatctgaa
gcagagatgatgaaagtaagaaatcttggacgcaagagtttggaagaagtgaaagtcaaa
ctcattgatttgggtcttggattaaaagataaataa
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