Streptococcus nidrosiense: AAFQ93_03675
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Entry
AAFQ93_03675 CDS
T10825
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
snid Streptococcus nidrosiense
Pathway
snid03410
Base excision repair
snid03430
Mismatch repair
snid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAFQ93_03675 (recJ)
03430 Mismatch repair
AAFQ93_03675 (recJ)
03440 Homologous recombination
AAFQ93_03675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snid03400
]
AAFQ93_03675 (recJ)
DNA repair and recombination proteins [BR:
snid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAFQ93_03675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAFQ93_03675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAFQ93_03675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
XHB98068
LinkDB
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Position
771528..773753
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AA seq
741 aa
AA seq
DB search
MIIPTYNWQFAPQVEDADFTKIAKKAGLGPEVARLLFERGIKDETSLKKFLEPSLEELHD
PYLLNDMEKAVERIRHAIEQGELILIYGDYDADGMTSASIVKESLEQIGAECLVYLPNRF
TDGYGPNASVYKYFIEQQGVSLIVTVDNGVAGHEAIDLAQSMGVDVIVTDHHSMPEVLPD
AYAIIHPEHPGADYPFKHLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLTDENR
IMVQYGLEILRNTQRMGLQEMIEIAGISSSDVTEETVGFQLAPRLNALGRLDDPNPAIDL
LTGFDDEEVHEIALLIHQKNEERKEVVQSIYDEAKGMVDPDKSVQVLAKEGWNPGVLGIV
AGRLLEELGQTVIVLNIEDGRAKGSARSIEAVDIFEALDPHRELFIAFGGHAGAAGMTLE
VDKLEVLSDVLETYIREKGADAQGKNNLFLDEELDLEALSLETVKSFERLAPFGMDNQKP
VFYIRDFQVENARVMGAGNAHLKLKISKGEASFEVVAFGQGKWATEFSQTKQLELAVTLS
VNQWNGQTTLQLMMVDARVEGVQLFNIRGKNALLPEGVAVLDFTQELPDVTSCSAIVVKN
IPEDISLLKKICQEQEFSALYFKNDIAKAYYLTGYGTREQFAKLYKTIYQFPEFDIRYKL
KDLAAYLKIEQILLVKMIQIFEELGFVTIENGVMRVNKEAEKRDIAESQIYQKLKQTVKD
QEIMALGTVQEIYDFLMEKNE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgataattcctacttataattggcaattcgctccgcaagttgaggatgcggattttaca
aagatagctaagaaagctggtttgggacctgaagtagctcgtttgttatttgaacgaggc
atcaaggatgaaactagtctaaaaaaatttttagaaccttctttggaggaattacatgat
ccctaccttttaaatgatatggaaaaggcagtggagcggattcgccatgctattgagcaa
ggggaactgattctgatttacggggactacgatgcggatgggatgacttcggcttccatt
gttaaggaaagtttagagcagataggtgctgagtgcctggtctatcttcccaatcgcttt
acagatggttatggtccaaatgccagtgtctacaaatattttatcgaacagcagggtgtg
tctttgattgtgacggtggacaatggtgtggcggggcatgaagccattgatttggctcag
tctatgggagtggacgttattgtgaccgaccaccattctatgcctgaagttttaccagat
gcctatgctattattcatcctgaacatccaggggcggactatcctttcaagcatctagcg
ggttgtggagttgcttttaagctagcttgtgcccttttggaagaagtgcaggttgagttg
ttagacttggttgctatcggtacaattgccgatatggtcagcttgactgacgaaaatcgc
atcatggtccaatatggtcttgaaatcttgcgcaatactcaacgaatgggcctgcaagaa
atgattgaaatcgctgggatttcgagtagtgatgtgacagaagagacggttggttttcag
ttagcacctcgtttaaatgctctaggacgtttggatgatcccaatccagctattgatttg
ttgactggatttgacgatgaggaagtgcatgaaatcgcccttttgattcatcaaaagaat
gaagaacgtaaggaagttgttcagtcgatttacgatgaagccaagggcatggtggatcct
gataaaagtgttcaagttttggctaaagaaggctggaatccgggagttcttggaattgta
gctggacgcttgttggaagaactaggtcagacagttattgtgctaaatatcgaagatgga
cgcgccaagggaagtgctcgaagcatagaagcagtcgatatctttgaagccttggaccca
catcgagaactttttatcgcctttggtggtcacgcaggtgctgcagggatgacccttgaa
gtggataagctggaagtcttgtctgatgttttggaaacctatatccgagaaaaaggcgca
gatgcccaaggtaaaaacaatctatttttagatgaagaactggatttagaggccttgagt
ttggagacggtgaaaagttttgaacgtctcgctccttttgggatggataaccaaaaacct
gtcttctacattcgagattttcaagttgaaaatgctcgcgttatgggggctggtaatgct
catctcaagctgaaaatttcaaaaggtgaggccagttttgaggtagtcgcttttggtcaa
gggaaatgggcgactgaattctcacagaccaagcaactggaactagcagtgactctctct
gtcaaccaatggaatggacaaacaaccttgcagttgatgatggttgatgcccgtgtagaa
ggtgtccagctctttaacatccgtggtaagaatgccctgttgccagaaggggtagccgtt
ttggactttacgcaagagttacctgatgtgacctcttgttcagctattgtcgtaaaaaat
atccctgaggatatatccctccttaagaaaatctgtcaggagcaggaattttcagctctt
tactttaaaaatgatatagccaaggcttactatttgacgggatatggaacgagagagcag
tttgcaaaattgtataaaaccatctatcagtttccagagtttgacattcgctataaactc
aaggatttggcggcctatctcaagattgagcaaatcttgttagtcaaaatgattcagata
tttgaagagcttggctttgtgaccattgaaaatggtgtcatgagggtgaataaagaggct
gaaaagcgtgatatagctgagagtcagatttatcaaaagctgaaacaaactgttaaagat
caagagattatggctcttggaacagttcaggaaatctatgatttcttaatggaaaaaaat
gaatag
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