Streptococcus nidrosiense: AAFQ93_04365
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Entry
AAFQ93_04365 CDS
T10825
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
snid Streptococcus nidrosiense
Pathway
snid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAFQ93_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snid03400
]
AAFQ93_04365
Enzymes [BR:
snid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAFQ93_04365
DNA repair and recombination proteins [BR:
snid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAFQ93_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD_C
UvrD-helicase
DEAD
AAA_22
RsgA_GTPase
HHH_5
Herpes_Helicase
nSTAND3
AAA_28
5_3_exonuc
AAA_29
AAA_12
SLFN-g3_helicase
NPHP3_N
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XHB97952
LinkDB
All DBs
Position
complement(906287..908653)
Genome browser
AA seq
788 aa
AA seq
DB search
MEVYFSGTIERIIFENVSNFFRILLLDIEDTNAEDFDDYEIIVTGTMADIIEGEEYTFWG
QIIQHSKYGEQLQMTRYERAKPTSKGLVKYFSSSHFKGIGLKTAQKIVDIYGDNTIDKIL
ENPDKLQFISGLSAKNREAFVSTLRLNYGTEMVLAKLANYGIPNKLAFQIQDFYKEETLE
IVENYPYQLVEDIKGLGFTIADQLAQELGIESQAPERFRAGLVHSLFQGCMETGDTYLEA
RDLLEQTLNLLESSRPVELDPSQVAQELAYLIEEDKVQQIDTKIFDNSLFFAEEGIRSHL
IRILEKGQSKKQDLETIQEHITTVEEELGIKYDSIQKQAICDAIQNKIFILTGGPGTGKT
TVINGIIAVYALLEGLDLKKKSNLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDD
DTSHLEDYLDADFIIVDEFSMVDTWLANQLFSNISSNSKILIVGDSDQLPSVSPGQVLAD
LLQIPTIPQTRLERIYRQSEESTIVTLASQIRQGILPADFTQKKADRSYFEIASNHIPAS
IEKILGAAIRSGIPARDIQVLAPMYRGTAGIDAINQLMQDLLNPPQKDQLSFEAPQCHYR
TGDKVIHLVNDAEVNVFNGDLGYITDLIPGKYTESKQDEIVIDFDGNEVSYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPITSASKRMLERNLIYTAITRAKSKLILLGEIQAFDYATQ
HIGTARKTYLIERFADLMENAEETNQLATDITTSTDSEQSYILTEDNWSNIPAMIGITEE
DLQEFFGK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttatttttcaggcaccattgaacgcattatttttgaaaatgtcagcaatttt
ttccgtattttacttctagatattgaggataccaatgctgaagactttgatgattatgaa
atcattgtcacaggtaccatggctgatatcattgaaggagaggaatacaccttttgggga
caaatcatccaacactccaaatatggtgaacaactacagatgactcgctatgagagagcc
aagccgactagtaagggcttggtcaagtatttctccagcagtcatttcaagggaattgga
ctcaaaacagctcagaaaattgtggatatttacggagataacactattgacaaaatctta
gaaaatccagacaaactccagtttatctctggcctctctgctaaaaatcgtgaagccttt
gtctcaactcttcgtcttaattacggaacagagatggtcttagccaaactggctaattac
ggcatcccaaataagctagcctttcagatccaagacttttacaaggaagaaacgctagag
attgtcgagaactatccctatcaactggtcgaggatatcaagggtttgggatttaccatc
gctgaccaattggcccaagaactgggaattgaaagccaggctcctgagcgcttccgtgcg
ggtcttgtccatagtctctttcaaggttgcatggagacaggagatacctatctggaagct
agggacttgttggagcaaaccctcaaccttctggaatcctcccgtccagtcgaactagat
ccgagtcaagttgcccaagagcttgcttatctgattgaagaagataaggtccagcagatt
gacacaaaaatctttgataatagtctcttttttgcagaagaagggattcgcagtcatctc
atcagaatcctcgaaaaaggtcagagtaaaaaacaggatctagagactattcaagagcat
atcacaactgttgaggaagaactggggattaagtatgatagtattcaaaaacaggccatc
tgcgatgctatccaaaacaagatctttatacttacaggtggacctggtactggtaagaca
actgttatcaatggcattatcgctgtctatgctcttttggaaggactggacctcaagaaa
aagagcaatctacccattctcctagctgctccaactggtcgcgcagcccgtcgcatgaac
gaattgacaggtctaccaagcgctaccattcaccgccacctgggcatgactggagatgac
gatactagccatctggaagattatctggatgctgactttatcattgttgacgagttttcg
atggtagatacttggctggccaaccagctcttctccaacatctcttcaaacagtaaaatc
cttatcgtaggtgacagtgaccagctgccttctgtcagtcctggtcaagttctggctgac
ctactccagataccaaccatccctcaaacacgtttggaaagaatctaccgtcagagcgaa
gaatcaaccatcgtcactcttgcaagtcagattcgccagggaatattacctgcagatttt
acccagaaaaaagcagaccgctcctactttgaaatcgctagtaaccatatccctgctagc
attgaaaaaatcctaggtgctgctatcagaagtggcattcctgctcgcgacattcaggtt
cttgcccctatgtaccgtggaactgcaggtattgatgccatcaaccagctcatgcaagac
ctccttaatcctccacaaaaagaccagcttagctttgaagctcctcagtgtcactatcga
acaggagataaggttatccacctagttaacgatgcagaggtcaatgtctttaacggagac
ttaggctatatcacagacttgattccaggaaaatacaccgagtccaagcaggatgagatt
gtcatcgattttgatggtaacgaagtttcctatcctcgaaatgaatggtacaagattcgt
ttagcctatgccatgagtatccacaagtctcaggggagcgagtttcccgtcgttattcta
cctatcaccagtgcaagtaagcgcatgttagagcgtaatctcatctacactgctatcact
cgggccaaaagtaaactgattttactaggcgaaatacaggcctttgactatgcaactcaa
catatcggaacagctcgtaagacctatctaattgaacggttcgctgacctaatggagaat
gccgaggaaacaaaccaacttgctaccgatattacaacttcaacagattctgaacaatcc
tacatcctaaccgaggacaactggtctaatattccagccatgattgggattactgaagaa
gacctgcaggagtttttcggaaaataa
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