Streptococcus nidrosiense: AAFQ93_05265
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Entry
AAFQ93_05265 CDS
T10825
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
snid Streptococcus nidrosiense
Pathway
snid03030
DNA replication
snid03430
Mismatch repair
snid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAFQ93_05265
03430 Mismatch repair
AAFQ93_05265
03440 Homologous recombination
AAFQ93_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snid03032
]
AAFQ93_05265
03400 DNA repair and recombination proteins [BR:
snid03400
]
AAFQ93_05265
Enzymes [BR:
snid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAFQ93_05265
DNA replication proteins [BR:
snid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAFQ93_05265
DNA repair and recombination proteins [BR:
snid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAFQ93_05265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF4268
FKBP26_IF
Motif
Other DBs
NCBI-ProteinID:
XHB96361
LinkDB
All DBs
Position
1112210..1115311
Genome browser
AA seq
1033 aa
AA seq
DB search
MIAQLDTKTVYSFMESMISIQKYVDQGKAYGYSALGIMDIDNLYGAYYFIKECQKQGIQP
VLGLEMTVHHKEELVNLRFLALSNHGYRNLMKISTLKMTGKKEWTDFSPYLEDVCVIVPY
YSSIDFLDLGHDYYIGVYPDTPQSNFSHSILPLYRVNSFESEDLETLQMLKAIKENVTLR
EVDVQSQQGLFLPADRLEQVFQEKFPQALENLSELIGATTYEIDSSLKLPRFNPERPAVE
ELRERAIKGLEQKGLLDSVYQARLEEELSVIHDMGFDDYFLVVWDLLRFGRSQGYYMGMG
RGSAVGSLVAYALNITGIDPVAKNLIFERFLNRERYTMPDIDIDIPDIYRPEFIRYVRDR
YGSIHAAQIVTYSTFGAKQAIRDVFKRYGVPEYELTSITKKIGFKDTLTIAYEGNLGFRQ
LIQSKIEYQKAFSIAKKLEGYPRQTSIHAAGVVISDKNLTDYIPLKYGEDMLITQYDAHG
VEGNGLLKMDFLGLRNLTFAQKMQELLFETQGIQLRIEEIDLEDRETLALFAAGKTKGIF
QFEQPGAIRLLKRVKPESFEEVVATTSLNRPGASDYIDNFVARKHGKEKVTVLDPALEDI
LAPTYGIMLYQEQVMQVAQRYAGFSLGKADILRRAMGKKNAAEMHRMEESFIQGALEKGH
GKEQAQQVFAVMEKFAGYGFNRSHAYAYAALAFQLAYFKTHYPEIFYQVMLNYASGDYIL
DALEMGFELTPLSINTIPYQDKLTDKTIYLGLKSIKGMPRDFAYWILENRPFSSVEDFVT
RLPKNYQKLSLLTPLVEIGLFDSFEKNRQKILSNLPTLFIFVEELGSLFADNSYNWLESE
DFTQVEKFRKEQEWLGVGISPHPLLILAKNPLYPIVSLSELSEGQTATVLVEIESIRVIR
TKKGENMAFLKVSDSKTKLEVTVFSDQYRQFNNLLHEGRFYYLNGKVQARDGRLQLVLNN
LKEAVSERFWIQAADHEHDSEIYHILEQYKGQIPVIIRYENEQKNVLLPGYFVAKDVSLQ
ESLSQITMKTIYR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcacaacttgatacaaaaacggtttatagtttcatggagagtatgatttccatt
cagaagtatgttgaccaagggaaagcatacggctactcagcacttggaatcatggatatt
gataatctctatggagcttattattttatcaaagagtgccaaaagcaagggattcagcct
gtattaggtcttgagatgactgttcatcataaggaggaactcgtcaaccttcgattttta
gccttgtcaaatcatggctatcgaaatctcatgaagatttcgactctaaaaatgacaggt
aaaaaggaatggactgatttttctccctatctagaagatgtttgtgttattgttccctat
tattcttcaattgatttcttggacttagggcatgactattatatcggagtgtatccagat
acacctcagtcgaatttttctcactccattctcccactttatcgtgttaattccttcgaa
tctgaggatttagaaacgcttcaaatgctcaaggcgattaaggaaaatgtgaccttgcga
gaggtagatgttcaatcgcaacaaggcttgtttttacctgctgatcgcttagagcaagta
tttcaagaaaagtttccgcaagccttagaaaatctttctgaactgattggagcaactact
tatgagattgatagtagtctcaagcttccacgtttcaatccagagcgtcctgctgttgaa
gagttgcgcgaaagagctattaagggcttggaacagaaaggcttactcgattcagtttat
caggctcgtttggaagaagaactatctgtgattcatgacatgggattcgatgactatttc
ttggttgtctgggatctcttacgttttggtcgttctcagggatattatatgggaatggga
cgtgggtctgcagttggaagtctagtggcctatgccttaaatattactggtattgatcct
gtagctaagaatcttatctttgagcgctttttaaatcgtgaacgctataccatgcctgat
atcgatattgatattcctgatatctatcgtcctgaatttatccgctatgttcgtgaccgt
tatggtagtattcacgctgctcagatagtcacctactcgacttttggtgccaaacaggct
atccgagatgtttttaaacggtatggtgttcccgagtacgagttgacatccataaccaag
aaaattggtttcaaagataccttgacaatcgcctatgaaggcaatctaggatttagacaa
ctgattcaaagtaagattgagtaccaaaaagccttttctatcgctaaaaaactagaaggt
tatcctcgacagacctctatccacgctgctggtgtcgtgattagtgataaaaatctaacg
gactatattcctcttaagtatggtgaggatatgctcattacccagtatgatgcacatgga
gttgaaggaaatggcttgctcaagatggatttcttaggcttaagaaacctaactttcgct
caaaaaatgcaggagctcttatttgaaactcaaggaattcagttaaggattgaggaaatt
gatcttgaggatagggaaactttagccctctttgcagctgggaagaccaaggggattttt
cagtttgaacaacctggtgctattcgcttattaaagcgcgtgaaaccagaaagctttgaa
gaagtagtggcaacgacttccctcaacagaccgggagcgagtgactatatcgacaacttt
gtggctcgaaaacatggtaaagaaaaggtaacagttctggacccagctttggaagatatt
ctggctccaacttatggcattatgctttaccaagaacaggtgatgcaagtagctcagcga
tatgctggttttagccttgggaaggccgacattttacgtcgtgccatggggaaaaagaat
gcagctgagatgcaccgaatggaggaaagtttcatccaaggagcactcgaaaaaggtcat
ggaaaagaacaggctcagcaggtttttgctgtcatggaaaaatttgctggttatggtttc
aaccgatcgcatgcttatgcttatgcggctttagccttccagcttgcttactttaaaaca
cattacccagaaatcttttatcaagtcatgctcaactatgccagtggagattatattctc
gatgccctcgaaatgggctttgaactgacaccactctctatcaatacaatcccatatcag
gataaattgacagacaagactatttacttgggacttaagagtatcaaggggatgcctcga
gattttgcctattggattttagagaatcgtccttttagtagtgtcgaagattttgtcact
cgcttgcctaaaaattatcagaagttgagtcttttaactcccctagtcgagattggttta
ttcgatagttttgaaaaaaatcgtcaaaaaatcttatccaacttacctactttgtttatt
tttgtggaagaattgggtagtttatttgcagataatagctacaattggcttgagagtgag
gattttacgcaagtcgaaaagtttcgtaaggaacaggagtggcttggagtcggtatcagt
ccgcatcccttactgattttagcaaagaatcccctctatccaattgtgagtttgtctgaa
ctatctgaaggacagacagctacagtactcgttgagatagaatccattcgtgtcattcgt
actaaaaaaggtgaaaacatggcttttctgaaagttagtgatagtaaaacgaagcttgaa
gtcacagttttttctgaccagtatcgtcaatttaacaatctcttacatgaaggaagattt
tactaccttaatggaaaagtgcaggcaagagacggtcgccttcagttagtattaaataat
ctaaaagaagcagtgagtgaacgattttggattcaggctgctgatcatgaacatgattct
gaaatttatcatattttagaacaatacaagggacaaattccagtcattattcgctacgaa
aatgaacaaaaaaatgttcttttgccgggttattttgttgcaaaagatgttagtttgcag
gaatctttgagtcaaataactatgaaaacgatttatcgttaa
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