Streptococcus nidrosiense: AAFQ93_06315
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Entry
AAFQ93_06315 CDS
T10825
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snid Streptococcus nidrosiense
Pathway
snid03420
Nucleotide excision repair
snid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAFQ93_06315 (pcrA)
03430 Mismatch repair
AAFQ93_06315 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snid03400
]
AAFQ93_06315 (pcrA)
Enzymes [BR:
snid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAFQ93_06315 (pcrA)
DNA repair and recombination proteins [BR:
snid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAFQ93_06315 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AAFQ93_06315 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHB96566
LinkDB
All DBs
Position
1342738..1345026
Genome browser
AA seq
762 aa
AA seq
DB search
MNELLKGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMKERAYGLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKQLNLDPKKWNERTILGTISNAKNDLIDDVAYAAQAGDMYTQIVAKCYTAYQKELR
QSESVDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFQN
ICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKTILQAANDVIKNNKN
RRPKNLWTQNADGEQIVYYRANDEQDEAVFVAKTIDELGRSQNFLHKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPG
TVEKIRDFANVQNMSMLDASANIMLSGIKGKAAQSIWDFANMILDLREQLDQLSITELVE
AVLEKTGYVDILNAQATLESKARVENIEEFLSVTKNFDDNPDNQEEETGLDKLSRFLNDL
ALIADTDSGSQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDMDELEEERRL
AYVGITRAEKILYFTNANSRLLFGRTNYNRPTRFINEISSDLLTYQGLARPANSSFKASY
SSGGVAFGQGMSLAQALQDRKRNAAPRSIDSKGLPFGQFATGSKSTSSETSWSIGDIALH
KKWGEGTVLEVSGNGSTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattattaaagggaatgaatgaccgtcaagctgaggctgttcaaacgactgaa
ggtccgttgctgatcatggcgggtgctggatctggtaagactcgtgttttaacccaccgt
attgcctacttaattgatgaaaagatggtaaacccatggaatatcttggccattaccttt
accaataaggcggcacgtgaaatgaaggagcgtgcttatgggctcaacccagctactcag
gactgtttgattgcgaccttccactctatgtgtgtgcgtatcctacgtcgtgatgctgac
cacattggctataatcgcaatttcacgattgtggatccaggggagcagcgaacgctcatg
aaacgtattctcaagcagttgaacttggatcctaaaaaatggaatgaacgcaccattttg
ggaaccatttccaatgctaagaatgatctgattgacgatgtggcttatgctgcccaggca
ggagatatgtacacgcaaattgtagctaagtgttatacggcctatcagaaagaacttcgt
cagtcagagtcggtggactttgatgacttaatcatgttgaccttgcgtctctttgaccaa
aatcctgatgttttgacttattatcagcagaagttccagtacatccacgttgatgagtat
caagataccaaccatgcccagtatcaattagttaaactcctggcttcacgctttcaaaat
atctgtgtagttggggatgcagaccagtctatctatggttggcgtggtgctgatatgcag
aatatcttggactttgagaaggattatcctcaagccaaagttgttttgttggaggaaaat
taccgttcgaccaagaccatcctccaagctgctaatgatgttatcaaaaacaataaaaat
cgccgtccaaagaatttatggactcaaaatgcggatggggaacagattgtctactatcgt
gctaatgatgaacaagacgaggctgtctttgtagccaaaaccatcgatgaacttggtcga
agccaaaacttcctccacaaggattttgcagttctttaccgtaccaatgcccaatctcgt
actattgaagaagctttgcttaagtccaatattccttataccatggttggtggaacaaaa
ttctacagccgtaaggaaattcgtgatattatcgcttatctgaatctcattgccaatttg
agtgacaatatcagttttgaacgcatcatcaatgaacctaaacgtggcattggtcctgga
acagtagagaaaattcgtgactttgccaacgtacaaaatatgtctatgctagatgcctca
gctaacatcatgttatcaggaattaaaggtaaggcagcccagtctatctgggattttgca
aatatgattctggatttgagggagcaactagaccaattaagcattactgagttagtggaa
gcagtcttggaaaagacaggctacgtggatattctcaatgcccaggcgactttggaaagc
aaggctcgggttgaaaatatcgaggagttcctttctgttaccaagaatttcgatgataat
ccagataatcaggaagaggaaactggactagataagctcagtcgcttcctcaatgacttg
gccttgattgcagatacagactctggcagtcaggaaacatcagaagtaaccttgatgacg
ctccatgctgccaagggactggagtttccagttgtattcttgattgggatggaagaaaat
gtctttccgcttagtcgtgcagcagaagacatggatgaattggaagaagaacgtcgtcta
gcctatgttggtatcacgcgcgcagagaaaattctctattttactaatgctaactcacgc
ttgctgtttggtcgaacgaactataatcgcccaacacgctttatcaatgagattagttca
gatttgttaacttatcaaggtttggctcgtccagctaatagtagcttcaaagcatcttat
agcagtggtggtgtcgcctttggtcaaggcatgagcctagctcaagctctacaagatcgc
aaacgcaacgcagcaccaagatcaattgactcaaaaggactaccttttggacagtttgct
actggatcaaaatcaacttcaagtgaaaccagctggtctattggtgatattgcccttcat
aagaagtggggcgaaggaactgttctagaagtttcaggaaatggatctactcaggaattg
aaaatcaatttcccagaagtcggccttaaaaaacttttagccagtgtagcaccgattgag
aagaagtaa
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integrated database retrieval system
