Streptomyces nigrescens: HEK616_03030
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Entry
HEK616_03030 CDS
T08756
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snig03021
]
HEK616_03030
Transcription machinery [BR:
snig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEK616_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_24
MarR_2
HTH_3
MarR
IF2_N
DUF7343
NirdL-like_HTH
Apolipoprotein
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BDM66816
LinkDB
All DBs
Position
complement(330326..331264)
Genome browser
AA seq
312 aa
AA seq
DB search
MSPRLDELRTDDTRQSASSTSPSDPTGHIPSQSIAAESDPAVFPEIDDLPEIPPFDEVGP
VDARALSKTLFERLESLEEGTHEFAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQKLDRAPTVHELAERLGITNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGY
EDHGLEGIEYVESLKPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LGRLRKGLMVEE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaactgcgtaccgacgacacccggcagtccgcatcgtcgaca
tccccgtccgacccgaccgggcacatcccttcccagtcgatcgctgccgaatccgatccg
gcggtttttcccgagatcgacgatctgcccgagatcccgccgttcgacgaggtgggtccg
gtggacgcgagggctctgtccaagaccctcttcgagcggctcgaatcgctcgaggaaggc
acccacgaattcgcttacgtccgcaacaccctggtcgagctcaacctcgccctggtgaag
ttcgcggcctcccgcttccgctcccgcagcgagccgatggaggacatcgtccaggtcggc
acgatcggcctgatcaaggcgatagaccgcttcgaactcagccgcggggtggagttcccg
acgttcgcgatgccgaccatcgtcggcgagatcaagcgcttcttccgcgacaccagctgg
tcggtgcgcgtcccgaggcgtctgcaggaactgcgtctggacctcgccaaggcgggcgac
gaactcgcgcagaagctggaccgcgcccccacggtgcacgaactcgccgaacgcctcggc
atcaccaatgacgaggtcgtcgaggggatggccgcgagcaacgcgtacaccgcgagctcg
ctggacgcccagcccgaggaggacgacagcgaaggcgcgctggcggaccggatcggctac
gaggaccacggactcgaaggcatcgagtacgtcgagtcgttgaagccgctgatcgccgaa
ctcccgccgcgcgaccggaagatcctgtccctgcgcttcgtggcgaacatgacgcagtcc
gagatcggcgaggagctgggcatctcccagatgcacgtctcccgtctgctctcccgcacg
ctcggccggctccgcaaggggctgatggtcgaggagtga
DBGET
integrated database retrieval system
