Streptomyces nigrescens: HEK616_04960
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Entry
HEK616_04960 CDS
T08756
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snig
Streptomyces nigrescens
Pathway
snig00061
Fatty acid biosynthesis
snig00071
Fatty acid degradation
snig01100
Metabolic pathways
snig01212
Fatty acid metabolism
snig02024
Quorum sensing
snig04146
Peroxisome
Module
snig_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HEK616_04960
00071 Fatty acid degradation
HEK616_04960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HEK616_04960
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEK616_04960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snig01004
]
HEK616_04960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snig04147
]
HEK616_04960
Enzymes [BR:
snig01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HEK616_04960
Lipid biosynthesis proteins [BR:
snig01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HEK616_04960
Exosome [BR:
snig04147
]
Exosomal proteins
Exosomal proteins of breast milk
HEK616_04960
Exosomal proteins of breast cancer cells
HEK616_04960
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
BDM67009
UniProt:
A0ABM7ZKW7
LinkDB
All DBs
Position
complement(566618..568696)
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AA seq
692 aa
AA seq
DB search
MRDISVPALAAPLRTGGLADSVFDTAAHQPDFAQLARRDDRAPDGWQEVTAREFRDEVMA
LARGLLADGIRPGARVALMSRTRYEWTLFSYALWAIGGELVPVYPTASAEQLRCILNGAD
VTAIVVEHEAHAMTVAEACDARSRLRRLWQLDLDCVQRLMEEGTRLTEADVHRLRHAVTP
GSTAAIVHTSGTTGRPRGCVITHANLAAECDTLYAGWGGLLAPPGERPSLLAFLPFAHVY
GLVVQVACLRGGVKLAHQPDPTSEELLPALASFRPTFLFAVPHVFEKICARARLAAERAG
RRRTFDAAMTVAVRYAEAQAAEARGTGRGPDPFLRARHALYERLVYSRIRDLLGGRVRTA
VSGGSPLLRELGLLFAGIGITVYDGYGLTETSGAITAQPPGRVRFGTVGLPLPGSAIHLA
LDGEVWVRGPVVFAGYLDDEEDDGGGVGAQAAGAGAVPGGRHRRGAGNGPSPGTGHGPRA
GHGPGGGHGPRTGTAPASGLYDGWLPTGDLGHLDDDGYLVITGRKKDIIITSNGKSVAPL
GLEQRLCAHPLISQCVVVGDNRPYVTALITLDPEALAQWRKLRGEPEEGGTGGSGADSGP
SPEEQLQAEVRRAVARANASVSRAESIRAFRILPGEFSQQSGLVTPSMKLRRAAIVRAYA
AEIDALYAQGERQAPETRKERRRWAAAGLYAR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgacatcagcgttccggccctggcggctccgctgcggaccggcggtctcgccgac
tccgtcttcgacaccgccgcacaccagccggacttcgcccagctggcgcggcgcgacgac
cgggcgccggacggctggcaggaggtgaccgcccgggaattccgcgacgaggtgatggcc
ctggccagggggctgttggcggacgggatccggcccggcgcgcgggtcgcgctgatgtcc
cggacccgttacgagtggacgctgttcagctatgcgctgtgggcgatcggcggggagttg
gtgccggtctacccgaccgcgtcggccgagcagctgcgctgcatcctcaacggggcggac
gtcacggcgatcgtcgtcgagcacgaggcgcacgccatgaccgtggcggaggcgtgcgac
gcgcgctcccggctgcgccggctgtggcagctggacctggactgcgtgcagcggctgatg
gaggagggcacccggctgaccgaggccgatgtgcaccggctgcggcacgccgtcacgccc
ggttcgaccgcggcgatcgtgcacacctcgggcaccaccgggcgcccgcgcggctgcgtc
atcacgcacgccaatctcgccgccgagtgcgacaccctctacgcgggctggggcggactc
ctggccccgcccggcgaacgcccgtcgctgctggcgttcctgccgttcgcgcacgtctac
gggctcgtggtgcaggtcgcgtgcctgcgcggcggggtcaagctcgcccatcagcccgac
ccgacctcggaggagctgctgcccgccctggcgtcgttccggccgacgttcctgttcgcg
gtgccgcacgtcttcgagaagatctgcgcccgtgcccggctcgccgccgaacgggccggc
cgacggcggacgttcgacgcggcgatgacggtcgcggtgcgctacgccgaggcgcaggcc
gcggaggcccgcggcaccgggcgcggccccgaccccttcctgcgggcccggcacgcgctc
tacgagcggctggtgtactcccgcatccgggacctgctgggcggccgggtgcggaccgcg
gtgtccggcggttcgccgctgctgcgggagctgggactgctcttcgccggcatcggcatc
accgtctacgacggctacggcctgacggagaccagcggtgcgatcaccgcccagccgccg
ggccgggtccgcttcgggacggtgggcctgccgctgcccggcagcgcgatccatctggcg
ctggacggcgaggtgtgggtgcgcgggccggtggtgttcgcgggctatctggacgacgag
gaggacgacgggggcggggtcggcgcccaggccgccggtgccggcgccgtaccgggcggc
cggcaccggcgcggcgcgggcaacggcccctcccccggcaccggccacggaccccgcgcc
ggccacggccccggcggcggccacggtccccgcaccggcaccgctcccgccagcgggctg
tacgacggctggctgccgaccggcgacctcgggcacctggacgacgacggctatctggtc
atcaccggccgcaagaaggacatcatcatcaccagcaacggcaagagcgtcgccccgctg
gggctggagcagcggctgtgtgcccatccgctgatctcgcagtgcgtggtcgtcggcgac
aaccggccgtacgtgacggcgctgatcaccctcgatccggaggcactggcgcagtggcgg
aagctgcgcggcgagccggaggagggcggtacgggcggcagcggtgcggactcggggccg
tcgccggaggagcagttgcaggccgaggtccggcgggccgtggcgcgcgccaacgcctcg
gtgtcccgcgccgagtcgatccgcgccttccgcatcctgccgggcgagttcagccagcag
tccggcctggtgacgccgtcgatgaagctgcgccgggcggcgatcgtacgggcctacgcg
gcggagatcgacgccctgtacgcgcagggcgagcgccaggcgccggagacccgcaaggaa
cgccgccggtgggcggcggcgggcctgtacgcacgctga
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