Streptomyces nigrescens: HEK616_06920
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Entry
HEK616_06920 CDS
T08756
Name
(GenBank) hypothetical protein
Organism
snig
Streptomyces nigrescens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
AAA_16
Beta-prop_IFT140_1st
NPHP3_N
nSTAND1
AAA_22
NACHT
AAA_29
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BDM67205
LinkDB
All DBs
Position
797216..801469
Genome browser
AA seq
1417 aa
AA seq
DB search
MSRALVVAVGSFRSPVVEGEELAVGAELWGPLDFVYRAHPQVQRALGRIGYPVDAVVDPG
LPELRMAVGQAMDEGHRIIHVISHGRTGDRQDPYRLDVVTSDALTGMGSNVSDWVSAVQA
SGRPTLFLLDLCRAGLAARLPFMLQLADEDTSAWVIAAAGGGEDAFDGRFSLAVAEVLEE
CARTGLGSDPSQRYVSFSLLARRIGDRVSRMAGVPQTVHATPLDPSRPEPCLPFVPNPCF
VDDPLLSARRELPPSLRAFLDSAESPDLRDAGHFTDRAGRHFTGRRSQLSQVAPWLDGLG
QGGLGLVTGRPGSGKSALLGAVVCAAHPALARAAPHIRARLAVDPGACPSPSPLLAAVHA
RQRTPGDLLPDLARQLRLAEPATGWTPDALVAAITGLPEQPVIVLDALDEAVGPRSLMAD
LLLPLATARRPDTRPSCRLLVGVRPWDEFAPLRKLASADGLLIDLDAVDADELRRDLADY
LRAELADLDGYSSGARRAVRDRLAEAAADRLTGTTDRHWGAFLVASVFTRYLAAAASPES
LPEARQLGHSVPTTLQGVLELDLQARSHASAVRALLTAVAHAKGEGMPMELALPLATALC
GETDGLPSALPSALFYLRTSVDRDGTTLYRLFHQGLADYFRSRSTHPSVAHLPGTRSTAD
LVLNTLLTRPGGSATPVRWDATPPYLLRHAIQHALDAGRADELLKDTEFLVHADPDTLAP
ALAVAETGPAELEVAVYRASGGLHRWAAPATRRSLLAVDAARYRAQDLLEQLNAPLPKTS
WRPRWATGSQVSAALRDTLRGHTAEVDAVACTVLDDRPVAVTGGMDETVRVWDLHSGQQL
GEPLAGHTDWVEAVACISLDGEPVVISASADRTLRRWSLTERRQVGAPLMGHTNRVSAVS
LAALDGGPVAVSGSADGTVRVWDLRSGQQLGAPLEGHTSDVTAIACTELDGGPVAVSAGA
DATVRVWDLRRRCQVGEPFRGHARPVLAVACTELDGGPVAVSASGDGEVRLWDLSGCREH
GGRLAGPTVQAEAITCTTLDGGRPVAVTGADDGTVRLWDLAARRASGSPLTGHTGPVLAV
ACGTVDGRPTAVSAGVDETVRVWDLGHRRRPGDPLPGHTDQLEAVACTVVEGRPVAVTGG
MDDTVRFWDLAAGRPLGNPLRDHGAWVRAVACTVVDGRPVAVSGGSDGMVRLWDPGTRMQ
LGAPIVADVKVVTALACTTLAGRAVAVAGADDGTVRLWDLDGRRLLGDPLAGHRGEVLAL
ACTVIDNRPVAVTAGEDGTVRLWDLLERSPVGGPLTGHTEPVLAIACTVLQGRPVAVTGA
DDCTVRLWDLRSRRPIGVHRADHRGSAIAVTCAELDGRPTALVGWGDGTVLLQDLTTRMS
TVVPTPADVFALALAEDGSLVVAGGFEVIVMERGVAR
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtgccctggtcgtggccgtggggagcttccggtccccggtcgtcgagggcgag
gagctcgcggtcggagcggagctgtggggcccgctggacttcgtctatcgggcgcacccc
caggtgcaacgagccctgggacggatcgggtatccggttgacgcggtggtagaccccggt
ctgccggaattgcggatggccgtcggccaggcaatggacgagggccaccggatcatccac
gtgatatcgcacgggcggaccggcgaccggcaggacccgtaccgcctggacgtggtcacg
tccgacgcgctcaccggcatggggtcgaacgtgagtgactgggtgtccgccgtccaggca
tccggtcggccaacgctctttctgctcgacctgtgccgggccggcttggctgcccggttg
ccattcatgctgcagctcgccgacgaggacaccagcgcgtgggttatcgcggcggccggt
ggcggggaggacgccttcgacggccggttcagtctcgccgtcgccgaggtcctggaggag
tgcgcccggaccgggcttggcagcgacccctcccagcgctacgtgtccttctcgctgctg
gcccgccgcatcggggaccgggtcagccggatggccggtgtaccgcagaccgtccatgcg
actccgctggacccaagtcggcccgaaccgtgcctgcccttcgtccccaacccgtgcttt
gtcgacgaccctctactgtcggcccgtcgggagcttcccccgtcgttgcgggccttcctc
gacagcgccgagagcccggacctgcgggacgccggccacttcaccgaccgggcgggccgc
cacttcaccggccgccgcagccaactctcccaggtggcaccctggttggacgggctgggg
cagggcgggctgggcctggtgaccgggcggcccgggagcggcaagtcggcgctgctgggg
gcagtggtgtgcgcagcgcacccggccctggcacgggcggcgccacacatccgggcccgc
ctggcggtcgatcccggcgcctgcccctcgccgagcccgctgctggccgccgtccacgcc
cgccagcgcacccctggtgacctgctgccggacctggcccgccagctgcgcctcgcggag
cccgccactggctggaccccggacgcgctcgtggcggcgattaccggcctgccagagcag
ccggtgatcgtgctggatgcactggacgaggccgtcggcccccgctcattgatggcggat
ctgctcctgccgctggccaccgcccgccggcccgacacacggccgtcctgtcgccttctg
gttggtgtccggccgtgggatgagttcgcaccacttcgcaagcttgcgagcgccgacggc
ctcctgatcgacctcgacgcggtcgacgctgacgagctgcgccgggacctggccgactac
ctccgggctgagctggccgacctcgacggctacagcagcggcgcccggcgggccgttcgc
gaccggctcgccgaggccgccgcagaccgcctgaccgggacgacggaccggcactgggga
gccttcctggttgccagcgtcttcacccgctacctggccgccgcagcgtcgccggagagc
ttgccggaggcccgacagctcggccactctgtccccaccacgctgcagggcgtactggaa
ctggacctacaggcgcggtcccacgcgtcggccgtgcgcgcgctgctcaccgccgtagcg
cacgccaagggcgaggggatgcccatggagctcgccctcccgctcgccaccgcactctgc
ggggagaccgacggcctgcccagcgccctgccctcggcgctgttttacctgcggacctcg
gtggaccgcgacggaacgacgctctaccggcttttccatcaggggctcgccgactacttc
cgcagccggtccacccacccgtcggtcgcccacctacctggcactcggtcgaccgccgac
ctcgtgctgaacaccttgctcacccggccgggcgggtcggccaccccggtccgctgggac
gcgacgcctccctacctgctccgccacgccatccagcacgccctcgacgcgggccgggcc
gacgagttgctgaaggacacggagttcctcgtccacgccgacccggacaccctcgcgccg
gcgctcgccgtggccgagacgggaccggcggaactcgaggtcgccgtctaccgcgcctcc
ggcggcctgcaccgctgggccgccccggcgacccggcgcagcctgctggccgtcgacgcg
gcacggtaccgtgcccaggacctcctggagcagctcaacgcacccctaccaaagaccagt
tggcgcccccgctgggccaccggctcccaggtcagcgcggccctacgcgacaccctccgc
ggccacaccgccgaggtcgacgccgtggcctgcacggtactggacgaccggccggtcgcc
gtcaccggcgggatggacgagacggtccgtgtatgggacctgcacagcggtcagcaactc
ggtgagccgctcgccggtcacactgactgggtggaagcggtggcgtgcatttcgctggac
ggcgaacccgtcgtcatcagtgcgtccgccgaccgaacgctgcgccggtggtccctgacc
gaacggcggcaggtcggcgctcccctgatgggccacaccaatcgggtctccgcagtgtcg
ctcgccgcgctcgacggcgggccagtcgcagtcagtggatcggcggacgggacagtccga
gtctgggacctgcggagcgggcaacagctcggcgcgccgctcgaggggcatacctcggac
gtgacggcgatcgcctgcaccgaactcgacggcgggccggtcgccgtgtcggccggtgct
gacgcgactgtccgggtgtgggacctgcgccgccggtgccaggttggagagccgttcagg
ggccatgccaggccggtgttggcggtcgcctgcaccgaactcgacggtgggccggtcgcc
gtatcggccagtggcgacggggaggtccgcctctgggatctgagcgggtgcagggaacac
ggcgggcgcctcgcggggccgaccgtccaggcggaggcgatcacctgcacgacgcttgac
ggcggccgtccggtggccgtcaccggcgcagacgacggcacggtgcgcctctgggacctg
gctgcccggcgagcatccggcagcccgctgaccgggcacaccggccctgtgctcgccgtg
gcctgcggcacggtggacggccggcccacagcggtctccgccggcgtcgacgaaactgtc
cgggtgtgggacctcggccaccggcgccggccgggcgacccgctcccgggccacaccgac
cagctcgaggcggtggcctgcaccgtggtcgaaggcaggccggtcgcggtgaccggtggg
atggatgacaccgtccggttctgggacctggcggctggccgccccctcggaaacccgttg
cgcgaccacggagcctgggtgcgagcggtggcgtgcaccgtggtcgacggaaggccagtc
gctgtgagcggcggctccgacgggatggtgcgactgtgggatcccggtacccggatgcag
ctcggcgccccgatcgttgccgacgtcaaggtcgtcacggcgctcgcgtgcacgactctg
gccggtcgcgccgtcgcggtcgcgggggcagacgacggcaccgtccgcctctgggacctg
gacggacgacgcctactcggagacccactggccggtcaccggggtgaggtactggcgctc
gcctgcaccgtgatcgacaaccggccggtggccgtgacggctggtgaggacggcacggtg
cgcctctgggacttgctcgagcgcagcccggtcggtggcccgctgaccgggcacaccgaa
cctgtcctggcgatcgcgtgcacggtgttgcagggccgtccggtggccgtcaccggcgca
gacgactgcacggtgcgtctctgggacctgcggagccggcggccgatcggtgtccaccga
gcggatcaccgcggctcggcgatcgcggtcacctgtgcggagctggacgggcgtccgacc
gcactcgtcggctggggtgacgggactgttctgctgcaggatctgaccacacggatgagt
acggtggtcccgacccccgccgacgtcttcgccctcgcactggccgaggacgggagtctg
gtcgtcgccgggggattcgaggtcatcgtgatggaacggggggtggcgcggtga
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