Streptomyces nigrescens: HEK616_15830
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Entry
HEK616_15830 CDS
T08756
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
snig
Streptomyces nigrescens
Pathway
snig00450
Selenocompound metabolism
snig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HEK616_15830 (csd)
Enzymes [BR:
snig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
HEK616_15830 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
HEK616_15830 (csd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
KYNU_C
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BDM68096
LinkDB
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Position
1799483..1800739
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AA seq
418 aa
AA seq
DB search
MTQLPGLLDTEAIRKDFPLLDRQVHDGRKIVYLDNAATSQKPRQVLDALNAYYERHNANV
HRGVHVLAEEATALYEGARDKVAAFINAPSRDEVIFTKNASESLNLVANMLGWADEPYRV
DRETEIVITEMEHHSNIVPWQLLSQRTGAQLKWFGLTDDGRLDLTNIEEVITERTKIVSF
TLVSNLLGTFNPVETIIRRAQEVGALVCIDASQAAPHMVLDVQALQADFVAFTGHKMCGP
TGIGVLWGRQELLEDLPPFLGGGEMIETVSMHSSTYAPAPHKFEAGTPPIAQAVGLGAAV
DYLSSIGMDKIAAHEHVITEYAVKRLLEVPDLRIIGPSSAEDRGATISFTLGDIHPHDVG
QVLDEQGIAVRVGHHCARPVCLRYGIPATTRASFYLYSTPAEVDALVDGLEHVRNFFG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgacacagctgccgggcctcctcgacacagaggcgatccgtaaggacttccccctcctg
gaccgccaggtccacgacggccggaagatcgtgtacctggacaacgcggcgacctcgcag
aagccgcgtcaggtcctcgatgccctgaacgcctactacgaacgtcacaacgccaacgtc
caccgcggcgtgcatgtgctcgccgaggaggccacggcgctgtacgaaggcgcccgcgac
aaggtcgccgccttcatcaacgcgcccagccgcgacgaggtgatcttcaccaagaacgcc
tcggagtcgctcaacctcgtggcgaacatgctcggctgggccgacgagccctaccgcgtg
gaccgcgagaccgagatcgtcatcacggagatggagcaccactccaacatcgttccgtgg
cagctgctctcgcagcgcacgggtgcgcagctgaagtggttcggcctgaccgacgacggc
cgcctggacctgacgaacatcgaagaggtcatcaccgagcggacgaagatcgtttcgttc
acgctggtctccaacctcctgggcaccttcaacccggtcgagacgatcatccgccgggcc
caggaggtcggcgcgctggtctgcatcgacgcctcgcaggccgccccgcacatggtgctg
gacgtgcaggcgctgcaggccgacttcgtggccttcaccggccacaagatgtgcggcccg
accggcatcggcgtgctctggggccgccaggagctgctggaggacctgcccccgttcctg
ggcggcggcgagatgatcgagacggtgtccatgcactcctcgacctacgcgccggcgccg
cacaagttcgaggccggtacgcccccgatcgcccaagccgtcggcctcggcgcggccgtg
gactacctctcctcgatcggcatggacaagatcgccgcccatgagcacgtgatcacggag
tacgccgtcaagcggctgctggaggtccccgacctgcggatcatcggcccgagctcggcc
gaggaccgcggggcgacgatctccttcacgctcggcgacatccacccgcacgacgtcggg
caggtcctggacgagcaggggatcgcggtccgggtgggccaccactgcgcccgccccgtg
tgcctgcgctacggaattcccgcgaccacgcgagcgtcgttctatctgtactccaccccg
gccgaggtcgacgccctggtcgacggcctggagcacgtgcggaactttttcggatga
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