Streptomyces nigrescens: HEK616_19190
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Entry
HEK616_19190 CDS
T08756
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
snig03051
]
HEK616_19190 (pafA)
Enzymes [BR:
snig01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HEK616_19190 (pafA)
Proteasome [BR:
snig03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HEK616_19190 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
BDM68432
UniProt:
A0ABN6QQH4
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Position
2167804..2169165
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMMLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDTTGQRKVRLASGREASALEVQQEYYEKAVDFCDRRGIRTGLV
ERVLELWGRTLEAIRDQELDRISTEIDWVMKHQLIERYRTKNNITMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcgcctgacgaagtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctgtacttggacgtgggctcg
cacccggaatacgcaactcccgagtgcgacaacgtgaccgagctggtcactcacgacaag
gccggtgagcgcattctcgaaggcctgctcgtcgacgccgagcgccgcctgcatgaggag
ggaatcgcgggcgacgtctatctgttcaagaacaacaccgattcggcgggaaactcctac
ggctgtcacgagaattacctcgtcgcccgccacggcgagttctcccggctcgcggacatc
ctcattccgttcctggtcacccgccagctgctgtgcggcgcgggcaaggtcctgcagacg
ccgcggggcgccgtctactgcgtcagccagcgcgcggagcacatctgggagggcgtctcc
tcggcgaccacccgctcccgcccgatcatcaacacccgtgacgaaccgcatgcggacgcc
gagcgctaccgccggctgcacgtcatcgtcggcgactcgaacatgtccgagacgacgatg
atgctcaaggtgggcgccacggacctcgttctgcggatgatcgaggcgggcacggtcatg
cgcgatctgacgctggagaatccgatccgcgcgatccgcgaggtcagccacgacaccacc
ggacagcgcaaggtgcggctggccagcgggcgggaggcctcggcgctcgaagtccagcag
gagtactacgaaaaggcggtggatttctgcgaccgccgcggaatccgcaccggtctcgtg
gagcgcgtactggaactgtggggccgcaccctggaggcgatccgggaccaggaactggac
cgcatctcgaccgagatcgactgggtgatgaaacatcagctgatcgagcggtaccgcacg
aagaacaacatcacgatgtcccacccacgagtggcgcagatagacctcgcgtatcacgac
attcaccgccgccgggggctttactacctcctggagcggaagggtcaagccgcgcggatc
tgcaatgacttgaagatcttcgagggcaagtcggtgcccccgcagacgactcgggcccgg
ctgcgcggtgacttcatccgccgggcgcaggaacagcgccgggatttcaccgtcgactgg
gtgcacctcaagctcaatgaccaggcgcagcgtacggtcctgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgccgggatgtga
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