Streptomyces nigrescens: HEK616_19920
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Entry
HEK616_19920 CDS
T08756
Name
(GenBank) TetR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snig03000
]
HEK616_19920
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
snig01504
]
HEK616_19920
Transcription factors [BR:
snig03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HEK616_19920
Antimicrobial resistance genes [BR:
snig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
HEK616_19920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
Xre-like-HTH
HTH_24
HTH_IclR
TetR_C_24
AbiEi_4
HTH_20
HTH_31
TetR_C_32
PilB3_C
HTH_AsnC-type
HTH_7
LacI
HTH_18
HTH_11
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
BDM68505
LinkDB
All DBs
Position
2241055..2241633
Genome browser
AA seq
192 aa
AA seq
DB search
MSHSAILCLMAVDRERVLKEAAALLTRRASTSMDEIARAAGISRATLHRHFAGRDALIRA
LEEHGIARFAQAMDTARLDQGDAPAALRRLIREAEPVAAVLAFLFTENQLFEDGEINAGW
AELDARITALFRRGQEDGDFRLDLSAAWFTEAFYGLIGAGAWAVHEGRVARNDLTHSIAE
LLLGGIRRSMEK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcggctatcctgtgtctcatggccgtggatcgtgaacgggtactcaaggaa
gccgccgcgctgctgacgcgccgggcgtcgacgtcgatggacgagatcgcccgggccgcc
ggcatcagccgcgccaccctgcaccggcacttcgccggacgggacgccctgatcagagcc
ctcgaagaacacgggatcgcccggttcgcgcaggcgatggacaccgcccggctcgaccag
ggcgacgcccccgccgcgctgcgccggctgatccgggaggccgaaccggtcgccgccgtc
ctcgccttcctcttcaccgagaaccagctcttcgaggacggcgagatcaacgccggctgg
gcggaactcgacgcccgcatcaccgccctcttccggcgcggccaggaggacggcgacttc
cgcctcgacctgagcgccgcctggttcaccgaggcgttctacggcctgatcggtgccggc
gcctgggccgtccacgaaggacgggtcgcccgcaacgacctcacccactcgatcgccgag
ctgctgctcggtggcatccgacggagcatggagaaatga
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