KEGG   Streptomyces nigrescens: HEK616_20230
Entry
HEK616_20230      CDS       T08756                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
snig  Streptomyces nigrescens
Pathway
snig03030  DNA replication
snig03430  Mismatch repair
snig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:snig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HEK616_20230
   03430 Mismatch repair
    HEK616_20230
   03440 Homologous recombination
    HEK616_20230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snig03032]
    HEK616_20230
   03400 DNA repair and recombination proteins [BR:snig03400]
    HEK616_20230
Enzymes [BR:snig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HEK616_20230
DNA replication proteins [BR:snig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HEK616_20230
DNA repair and recombination proteins [BR:snig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HEK616_20230
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: BDM68536
UniProt: A0ABM7ZQE5
LinkDB
Position
complement(2274366..2275094)
AA seq 242 aa
MMPCWYDGPLAAFDTETTGIDVERDRIVSAALVVQETPRSAPRITRWLINPGVEIPEAAI
AVHGLTADHLALHGRWPAPVVEEVARALAAQSVAGRPLVVMNAPFDLTLLDRELKRHRAS
SLDAYLGGHPLRVLDPRVLDKHLDRYRKGRRTLTDLCAQYEVELTEAHDAAADALAALRV
VRALGHRFADRLGTLHPAELHTRQAIWYAAQARGLQAWFARSGSTESVDPHWPLRPELPA
AA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgatgccgtgctggtatgacggacctcttgccgccttcgacaccgagacgacggggatc
gacgtcgagcgggaccgcatcgtctccgccgcgctggtggtccaggagaccccgcgttcg
gcaccccgtatcacccgctggctgatcaatcccggcgtcgagataccggaagccgccatc
gcggtgcacggtctcacggccgaccacctcgccctgcacggccgttggccggcgccggtg
gtggaggaggtggcgcgggccctggccgcccagtcggtggccggccgcccgctggtggtg
atgaacgccccgttcgatctgaccctgctggaccgcgagttgaaacggcaccgcgccagc
tcgctggacgcgtatctgggcggccatccgctgcgcgtactggatccgcgggtgctggac
aagcatcttgaccgctatcgcaagggccgccgcacgctcaccgatctgtgcgcgcagtac
gaggtcgagctgaccgaggcgcacgacgcggccgcggacgccctggccgcgctgcgggtg
gtgcgcgcgctggggcaccggttcgcggaccgcctggggaccctgcacccggcggaactg
cacacccggcaggcgatctggtacgcggcccaggcccgtggactgcaggcgtggttcgca
cgcagcggcagtacggaatcggtggatccgcactggccgctgcgtccggaactccccgcc
gcggcctga

DBGET integrated database retrieval system