Streptomyces nigrescens: HEK616_26400
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Entry
HEK616_26400 CDS
T08756
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snig03021
]
HEK616_26400
Transcription machinery [BR:
snig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEK616_26400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
DUF7343
Sigma70_ECF
HTH_Crp_2
HTH_3
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
BDM69153
UniProt:
A0ABN6QW61
LinkDB
All DBs
Position
2986221..2987138
Genome browser
AA seq
305 aa
AA seq
DB search
MTSTGTMTAGTAVASRATTTSTRATTTSKGNAVPAPSVPLPPIDEPQRLAPSEARELSRA
FFERLAVLEEGTPEYQYVRNTLIEMNLSLVRYVARRFRSRGESTEDVLQVGTIGLIKAID
RYDVYRDVEFTTLAVPYIRGEIRRFFRDATWAVHVPRRLQELRIDLARAFEDLEAANNHD
PSAAELAAHLKLPEDEVREGLIACNGYDTDSIDRPIQTAGKQQTGLVADLMGSTDPALDL
AENIQALKPHLAQLDERERTLLRLRFGAEMTQAEIGKELNLSQMHISRLLNRACTKLRKG
LLAEV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaccggcaccatgacagcagggactgcggtagcgagccgggccaccactacg
tctacccgggccaccactacgtccaaggggaacgctgtcccggccccgtcggtgccgctg
ccgccgatcgatgagccgcagcgccttgcgccgagtgaagccagggaattgtcgagggcg
ttcttcgagcgactcgccgtccttgaagagggcacccccgagtaccagtacgtgcgcaac
acactgatcgagatgaatctgtccctggtgcgctacgtcgcccggcgcttccgcagccgg
ggggagagcaccgaggacgttctgcaggtgggcaccataggtctcatcaaggcgatagac
cgctacgacgtttaccgggacgtggagttcaccacgctggccgtgccgtacatccgtggg
gagatcaggcgtttcttccgtgacgccacctgggccgtccatgtgccgcgccggctgcag
gaactccgcatcgacctcgcgcgcgccttcgaagacctggaggccgccaacaaccacgat
ccttcggcggcagagctcgccgctcatctgaagctgccggaggacgaggtgcgggagggg
ctcatcgcctgcaacggctatgacaccgactccatcgaccggccgatccagaccgcggga
aagcagcagaccgggctcgtcgcggacctcatgggaagcaccgaccccgcgctcgacctc
gccgagaacatccaggcactcaagccgcatctcgcacagctcgacgagcgggaacgcaca
ctgctccggctccggttcggggcggagatgacccaggccgagatcggcaaggagctcaac
ctctcccagatgcacatatcccggctgctgaatcgagcctgcaccaagttgcggaaggga
ctgcttgccgaggtgtga
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