Streptomyces nigrescens: HEK616_27970
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Entry
HEK616_27970 CDS
T08756
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snig01002
]
HEK616_27970
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
snig02042
]
HEK616_27970
Enzymes [BR:
snig01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
HEK616_27970
Peptidases and inhibitors [BR:
snig01002
]
Metallo peptidases
Family M9
HEK616_27970
Bacterial toxins [BR:
snig02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
HEK616_27970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
Motif
Other DBs
NCBI-ProteinID:
BDM69310
LinkDB
All DBs
Position
complement(3161008..3163332)
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AA seq
774 aa
AA seq
DB search
MTLCVTAAGTGYPATPSPAPRTAAAALGPATFAGATAPTPTPHDRVDRLAKAPKPSSLRI
PGPGGLGNDRVPGPHTPKAKAKATARTPHATVGKTAVPCTLDGITHLSPDQFTEFLAAPD
VTADGCLRTLIWTWDQRLAPVMSKDHIQAVAHRIGQVAAGHDGRNGSHLLEMFTYLHAVA
YQGFSHREIDLADPATLDAMRRAVDAFGSAAHTFDVTRSNAETLREALNAASAQGLRQYQ
LPLVKRVLATMGPDHPDTAKDSSWGGAALAALSVHYLGVYPGNKDTAFHAAVVADPSYRA
AFKAFAGYTHLKDTANAWVVRDAVGEYGRTGQIDRLRNEIVTGLGPLLDTTARNFGAYSA
PWAKVATWLIEFDACAPYKVCRQDIEKRLFPRTYTYGKAGTDGITVRTALDRDTVDQLYY
ASKQVKTQFHRVVGTEEPLAGDTNSTLHIVLYASRADYENFQPLLTGLGTSNGGIYIENG
ATFYTYQRRVPQDSTLTLEELFRHEYTHYLNGRWAVPGVFGQGPWYEGDRTTAMDEGTAE
FFDGSTRDDGIKVRKSLVKGIIADTANGGPRMTVDQLLHATYDGDGFRFYNYAGTFFEFL
WAEHPSLLKEMYRNLRADDPAAFDAWRTRLGRDAGLQREYDTFLDKNIAHVDDLFVPDTQ
HVPLASLTDSTPDQIRSSFTRSTGIAPDACGASGSTDRPRFTCDGRITANLADAGNADTV
FQDMSETVDFFVLDRAAQGDNNLRDMNCSFGEVEVWSNGRAGTSHFHCEGPLRR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctctgtgtcacggcggccggaaccggatacccggccaccccctcccccgccccg
cgcaccgccgccgcggccctgggcccggccaccttcgccggtgcgacggctcccacgccc
accccgcacgaccgggtcgaccgcctggccaaggcgcccaagccctcgtccctccggata
ccgggccccggcgggctcggcaacgaccgtgtccccggcccgcacacgcccaaggcgaag
gcaaaggcgacggcccgcacaccgcacgccacggtcggcaagaccgccgtcccctgcacc
ctcgacggcatcacgcacctctccccggaccagttcaccgagttcctcgccgcccccgac
gtcaccgccgacggctgtctgcgcaccctgatctggacctgggaccagcgcctcgcgccc
gtcatgtccaaggaccacatccaggccgtcgcgcaccgcatcggccaggtcgccgccggg
catgacggccggaacggcagccacctgctggagatgttcacctacctgcacgcggtcgcg
taccagggcttctcccaccgggagatcgacctcgccgacccggcgacgctggacgccatg
cgccgggccgtcgacgccttcggctccgccgcccacaccttcgacgtgacccgcagcaac
gccgagacgctccgcgaagccctcaacgcggccagcgcgcagggcctgcgccagtaccaa
ctcccgctggtcaaacgggtacttgccaccatgggcccggaccacccggacaccgccaag
gactcctcctggggcggcgccgcgctcgccgcgctctccgtgcactacctcggcgtctac
ccgggcaacaaggacaccgccttccacgccgcggtcgtggccgacccgtcctaccgcgcc
gccttcaaggccttcgccggctacacccacctcaaggacacggccaacgcctgggtggtg
cgcgacgcggtcggcgagtacggccgtaccgggcagatcgaccggctgcgcaacgagatc
gtcaccggcctcggcccgctcctggacaccaccgcccgcaacttcggggcatacagcgcc
ccttgggccaaggtggccacctggctgatcgaattcgacgcctgcgcgccgtacaaggtc
tgccgccaggacatcgagaagcgcctcttcccccggacctacacctacggcaaggccggt
acggacggcatcacggtccgcaccgccctcgaccgcgacaccgtcgaccagctctactac
gccagcaagcaggtcaagacgcagttccaccgggtggtcggaaccgaggagccgctggcc
ggagacaccaactccacgctgcatatcgtgctgtacgcctcccgcgccgactacgagaac
ttccagccgctgctgaccggcctgggcaccagcaacggcggcatctacatcgagaacggc
gcgaccttctacacctaccagcgccgcgtcccgcaggactccaccctcacgctggaggag
ctcttccggcacgagtacacgcactacctcaacggccgctgggcggtacccggcgtgttc
ggccagggcccctggtacgagggcgaccggaccacggcgatggacgagggcaccgccgag
ttcttcgacggcagcacccgtgacgacggcatcaaggtccgcaagtcactggtgaagggc
atcatcgccgacaccgccaacggcggcccccgcatgaccgtggaccagctcctgcacgcc
acctacgacggtgacggcttccgcttctacaactacgcggggaccttcttcgagttcctg
tgggccgaacacccctccctgctgaaggagatgtaccggaacctgcgggccgacgacccg
gcggccttcgacgcctggcgcacccgcctcggcagggacgcgggactccagcgggagtac
gacacgttcctcgacaagaacatcgcccacgtcgacgacctgttcgtccccgacacccag
cacgtccccctcgcctcgctgaccgacagcacacccgaccagatccgctcgtccttcacc
aggtccaccggcatcgcacccgacgcatgcggcgcctccggctcgacggaccgtccgcgg
ttcacctgcgacggccgcatcacggcgaacctcgccgacgccggcaacgccgatacggtc
ttccaggacatgtccgagaccgtcgacttctttgtgcttgaccgggccgcacagggcgac
aacaacctccgcgacatgaactgctccttcggcgaggtcgaggtctggtccaacggccgc
gccggcacgtcccacttccactgcgaaggccccctgcgccgctga
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