Streptomyces nigrescens: HEK616_29090
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Entry
HEK616_29090 CDS
T08756
Name
(GenBank) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
snig
Streptomyces nigrescens
Pathway
snig04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HEK616_29090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snig03019
]
HEK616_29090
03009 Ribosome biogenesis [BR:
snig03009
]
HEK616_29090
04131 Membrane trafficking [BR:
snig04131
]
HEK616_29090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snig04147
]
HEK616_29090
Messenger RNA biogenesis [BR:
snig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HEK616_29090
Ribosome biogenesis [BR:
snig03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HEK616_29090
Membrane trafficking [BR:
snig04131
]
SNARE
SNARE associated proteins
Others
HEK616_29090
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HEK616_29090
Exosome [BR:
snig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HEK616_29090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
RuvB_N
AAA_28
AAA_5
AAA_22
AAA_14
AAA_18
AAA_16
AAA_33
NACHT
AAA_lid_3
Acetyltransf_10
TsaE
AAA_17
AAA_2
TIP49
AAA_25
Cytidylate_kin
ABC_tran
AAA_24
RNA_helicase
SKI
Acetyltransf_6
AAA_19
nSTAND3
IPT
AAA_30
AAA_11
bpMoxR
IstB_IS21
Mg_chelatase
ATPase
DUF5906
Vps4_C
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
BDM69422
LinkDB
All DBs
Position
complement(3280050..3281339)
Genome browser
AA seq
429 aa
AA seq
DB search
MNWLIHDYRENDLAEVVHLIDSTADLGQESVFSLAECISALTSRQPAVVAVHQGAPIGAA
LACVAGERGWVMRIAISSAWRGRGLASALLVELERRLIAARVSRIAYVLPEEDLLGEGLL
NAGYTRQPAVAYFEKVEPHHGPAASLLEDLGGRFLPADLWAKVAGMEAEKDLIERRVVLP
LAEPERAARHGVRPPRAIALFGPPGTGKTTFARAIAARLGWPFVELLPSRLADEGNLAAA
LRSAFARIADLERVLVFIDEVEEIAPVRHEPAQPGGLHGVTNELLKLIPGFRERDERLLV
CATNSIRSLDPAFLRPGRFDYLIPIGTPDTVARSAIWSRYTDGRADVDVAALVAASELFT
PADIEHAARVAAQASFERDLESVGAGAGAHGRFGASTEDYLAAIAQCRPTVTPAMIDEFG
ADITAHARC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaactggctcatccatgactaccgcgagaacgatctcgccgaagtggtccacctgatc
gactccacggccgacctcgggcaggagtccgtcttctcgctcgccgagtgcatcagcgcg
ctgacctcgcggcagcccgccgtggtggccgtccaccagggagcgcccatcggcgccgcc
ctggcctgcgtggcgggtgagcggggctgggtgatgcggatcgcgatctcgtcggcgtgg
cgcggccggggcctggcgagcgcgctgctggtggagctggagcggcggctgatcgcggcc
cgggtgagccgcatcgcgtacgtcctgccggaggaggacctgctcggtgaggggttgctg
aacgccggctacacgcgccagcccgcggtggcctacttcgagaaggtcgagccgcaccac
ggtccggcggccagcctcctggaggacctcggcgggcggttcctgcccgccgacctgtgg
gccaaggtggcagggatggaggccgagaaggacctgatcgaacggcgggtcgtgctgccg
ctggcggagccggagcgggccgcccggcacggggtccggccgccgcgggcgatcgccctg
ttcggcccgccgggaaccggaaagaccaccttcgcccgggccatcgccgcccgtctcggc
tggccgttcgtcgagctgctgccgtcccggctggccgacgagggcaatctcgcggcggcg
ctgcgcagtgcgttcgcccggatcgcggatctggaacgggtgctcgtcttcatcgacgag
gtcgaggagatcgctccggtacgccatgagccggcccagccgggcgggctgcacggcgtg
accaacgagctgctcaagctgataccgggcttccgggagcgggacgaacggctgctggtg
tgcgcgaccaactcgatccgctcgctcgacccggcgttcctgcgcccgggccgcttcgac
tacctgatcccgatcggcacgccggacaccgtggcccgctcggcgatctggtcccgctac
accgacgggcgggccgatgtggacgtcgcggcgctggtggcggccagtgagctgttcacc
ccggccgacatcgaacacgccgcgcgggtggccgcgcaggcgtcgttcgagcgggacctg
gagtcggtcggcgcgggggcgggcgcgcacggccggttcggggcgagcaccgaggactac
ctcgccgccatcgcccagtgccggccgaccgtcacccccgcgatgatcgacgagttcggc
gcggacatcacggcccacgcacgctgctga
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