Streptomyces nigrescens: HEK616_33850
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Entry
HEK616_33850 CDS
T08756
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snig03016
]
HEK616_33850
Enzymes [BR:
snig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HEK616_33850
Transfer RNA biogenesis [BR:
snig03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HEK616_33850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
BDM69898
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All DBs
Position
3762289..3762888
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AA seq
199 aa
AA seq
DB search
MNGNPVFGGAEPVDALEVAPTARTAVAWLPPRKLWPVIQDIRWEHDPQVRRWPPHVNLLF
GFVPEEAFARAVPLLSAGAAQSTAFTARLAGVRYFRHRHYATLWLDPAAADPAPWARLHR
ELGLRFPLCHGRAGRFTPHLSLGRTQDPKRLAGECAARLGVLSAAVEEVVVLSRRGEGPM
RPRAVIALGTGEVRRPQDC
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgggaatccggttttcggcggggccgagccggtagatgcgctcgaggtggcgccg
acggcccggacggcggtggcgtggctgccgccgcggaagctgtggccggtgattcaggac
atccgctgggagcacgatccgcaggtacggcggtggccgccgcatgtgaatctgctattc
ggcttcgtgccggaggaagcgttcgcgcgggccgtgccgctgctctccgccggggcggcg
cagagcacggcgttcacggcgcgtctggccggagtgcggtatttccggcaccggcactac
gcgacgttgtggctcgatccggctgcggcggatccggcgccgtgggcccgtctccaccgg
gagctggggttgcggttcccactgtgccacgggcgcgccggccgcttcaccccgcatttg
tccctcggtcgcacccaggacccgaagcgcttggctggcgaatgtgctgcccggctcggc
gtgctgtcggcggcggtcgaggaggtggttgtgctctcccgacgcggcgaggggcccatg
cggcctcgggccgtgatcgcactgggcacgggcgaggtccgccgaccgcaggattgctga
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